Skyline Targeted Mass Spec Environment: /home/software/Skyline

Skyline Targeted Mass Spec Environment

Watch presentations from the Skyline User Group Meeting
at ASMS, San Diego, CA - Sunday, June 3rd, 2018

Watch Video of the latest Skyline Tutorial Webinar
PRM Method Development and Data Analysis

Skyline is a freely-available and open source Windows client application for building Selected Reaction Monitoring (SRM) / Multiple Reaction Monitoring (MRM), Parallel Reaction Monitoring (PRM - Targeted MS/MS), Data Independent Acquisition (DIA/SWATH) and targeted DDA with MS1 quantitative methods and analyzing the resulting mass spectrometer data. It aims to employ cutting-edge technologies for creating and iteratively refining targeted methods for large-scale quantitative mass spectrometry studies in life sciences.

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New! Spring Design and Analysis of Quantitative Proteomic Experiments at US HUPO in Washington, D.C. (March 2 - 3, 2019) - Register NOW!

New! Spring Practical Proteomics with Skyline Short Course at MSACL, Palm Springs, CA (March 31 - April 2, 2019) - Register NOW!

New! Spring May Institute for computation and statistics for mass spectrometry and proteomics at Northeastern University, Boston MA. (April 29 - May 10, 2019) - Register NOW!

Full

Spring Targeted Proteomics Course at the Buck Institute in the Northern San Francisco Bay Area (Navato, CA). (March 18 - 22, 2019)

Past

Fall Skyline@Duke Short Course, Durham, NC (December 10 - 14, 2018)

Fall Targeted Proteomics Course at PRBB, Barcelona (November 12-16, 2018)

Fall International Targeted Proteomics Course Shanghai (October 22 - 23, 2018)

Summer Targeted Proteomics Course at University of Washington, Seattle WA. (July 30 - Aug. 3, 2018)

Summer SWATH/DIA Course at ETH, Zurich. (July 2 - 6, 2018)

Spring Skyline User Group Meeting at ASMS in San Diego (June 3, 2018)

Spring Case Studies in Quantitative Proteomics Workshop at ASMS in San Diego (June 2 -3, 2018)

Spring Computation & Statistics for Mass Spec & Proteomics Course at Northeastern U. Boston, MA (April 30 - May 11, 2018)

Spring Targeted Proteomics Course at Buck Institute in the north San Francisco Bay area, CA. (April 2 - 6, 2018)

Spring Design and Analysis of Quantitative Proteomic Experiments at US HUPO in Minneapolis (March 10 - 11)

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Watch the Videos
from the 2018 Skyline
User Group Meeting

Recently Published

MacLean, JASMS - Using Skyline to Analyze Data-Containing Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry Dimensions
[full-text]

Sharma, Molecular & Cellular Proteomics - Panorama Public: A public repository for quantitative data sets processed in Skyline
[abstract]

Henderson, Clinical Chemistry - Skyline Performs as Well as Vendor Software in the Quantitative Analysis of Serum 25-Hydroxy Vitamin D and Vitamin D Binding Globulin
[abstract][article]

Pino, Mass Spectrometry Reviews - The Skyline ecosystem: Informatics for quantitative mass spectrometry proteomics
[abstract]

Bereman, Journal of Proteome Research - An Automated Pipeline to Monitor System Performance in Liquid Chromatography Tandem Mass Spectrometry Proteomic Experiments
[abstract]

More Publications

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MacCoss Lab Software