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Importing MyriMatch search results into Skyline after parsing them through PeptideProphet
staab-weijnitz
2024-03-16 09:33
staab-weijnitz
2024-03-18 21:13
Intensity Threshold on MS2 fragments??
zrhopkins
2024-03-14 04:37
Nick Shulman
2024-03-15 08:28
Regression
vmohanty
2024-03-14 09:53
vmohanty
2024-03-14 11:55
What are *.sky.view files and *.skyd and *.skyl. How can I open these files?
Jenny Albanese
2024-03-12 19:05
Nick Shulman
2024-03-12 19:39
Trouble identifying glycan modified peptides and quantifying ions in DIA data
nkegley
2024-03-08 11:00
Nick Shulman
2024-03-12 10:53
SRM/ MRM Method Development and Data Analysis with Skyline
naimamuntu
2024-03-11 11:17
naimamuntu
2024-03-11 13:34
"No Base Peak Chromatogram Found" when trying to integrate DDA data
jarrod a roach
2024-03-11 08:45
jarrod a roach
2024-03-11 12:20
Skyline not compatible with Shimadzu LCMS-8060
William
2021-04-19 21:10
Nick Shulman
2024-03-08 09:42
removing peaks' name
mdorrani
2024-03-07 14:22
Brendan MacLean
2024-03-07 22:01
PRM Target list creation from DDA data
Qssf
2024-03-05 18:41
Qssf
2024-03-06 12:34
Chromatogram Information Unavailable Message
csb548
2024-03-05 08:51
csb548
2024-03-05 09:49
BoxCar
ekilic
2024-02-29 13:50
Nick Shulman
2024-03-01 16:48
Predicted RT worsens after ?calibrating ("Use Results")
wphipps5
2024-02-29 15:54
Nick Shulman
2024-03-01 13:49
TSQ Atlis _ Chromatogram information unavailable
naimamuntu
2024-02-29 14:13
Nick Shulman
2024-02-29 17:04
Spectral library
andreas kalagasidis
2024-02-24 03:38
Nick Shulman
2024-02-29 10:03
Chromatogram information unavailable
liuh1
2024-02-26 13:35
Nick Shulman
2024-02-28 14:13
error importing fragpipe output into skyline
jdemeter
2024-02-27 16:34
Matt Chambers
2024-02-28 11:40
Failure opening Skyline-Daily file
samartinez3
2024-02-28 09:50
Nick Shulman
2024-02-28 10:03
Issues importing Small molecule transition list
m3g4n
2023-12-04 14:07
Brian Pratt
2024-02-27 13:45
TIC
herath lakmini senavirathna
2024-02-27 12:01
Nick Shulman
2024-02-27 12:41
DIANN out in Skyline
tania karasiewicz
2024-02-26 05:17
Nick Shulman
2024-02-26 14:22
Chromatogram information unavailable
Pa Nic 14
2024-02-23 13:02
Nick Shulman
2024-02-26 13:24
Error Exporting to MassLynx Only with Scheduled Method
cbm11
2024-02-22 01:28
cbm11
2024-02-26 05:16
Exporting scheduled MRM method to *.exp Masslynx
per larsson
2024-02-01 09:05
Rita Chupalov
2024-02-23 13:02
Error when Upload MSFragPipe output file to skyline
wchu3
2024-02-23 10:44
Nick Shulman
2024-02-23 10:55
Distinguishing between heavy carbon and heavy hydrogen
molly hopper
2024-02-22 11:24
Nick Shulman
2024-02-22 15:08
error using "DIA raw" option when performing Import Peptide Search
wphipps5
2024-02-21 14:53
wphipps5
2024-02-22 12:32
Cannot Import Chromatograms from MassLynx
cbm11
2024-02-19 06:40
Nick Shulman
2024-02-22 12:29
Explicit Retention Time from msp library for small molecules
meowcat
2024-02-13 02:56
meowcat
2024-02-22 00:29
skyline batch installation
chi nguyen
2024-02-21 16:45
Nick Shulman
2024-02-21 23:46
Skyline Error on MS data file import
db432
2024-02-21 04:43
Nick Shulman
2024-02-21 07:39
Regression fit
danielacgranato
2024-02-16 11:53
danielacgranato
2024-02-19 07:33
Analysis of Sciex MRM3 data from 7500 QTRAP
h l elfrink
2024-02-08 08:01
Nick Shulman
2024-02-16 09:45
Error in generating .mzid file
elvistc
2024-02-15 22:09
elvistc
2024-02-16 02:08
Importing fractionation sample to Skyline
GH
2024-02-15 13:23
Nick Shulman
2024-02-15 13:47
Filter peptide contains specific peptide in library
GH
2024-02-14 11:43
GH
2024-02-15 13:24
Comparing MS1 data with and without FAIMS
paul.derbyshire@tsl.ac.uk
2024-02-15 04:07
Brian Pratt
2024-02-15 10:31
a-ions from fully SIL labelled amino acids
jfoe
2024-02-14 04:35
jfoe
2024-02-15 08:22
How to get Skyline to produce different molecule calibration curves in a single instance?
manesh chand
2024-02-14 15:46
Nick Shulman
2024-02-14 15:55
Spectrum annotation inconsitencies
jfoe
2024-02-14 05:10
jfoe
2024-02-14 05:57
Spectral Library and Data processing
damlaaygun09
2024-02-12 04:46
damlaaygun09
2024-02-14 04:07
Building a spectral library using msp
laura corveleyn
2021-02-02 03:24
Juergen
2024-02-14 01:03
Chromatogram information unvailable
gazelezi
2024-02-13 12:42
gazelezi
2024-02-13 14:13
building a MS2 transition list
p de blaauw
2024-02-09 01:27
Nick Shulman
2024-02-13 07:20
uploading pdresult files without raw files
ssedigh2
2024-02-12 12:18
Nick Shulman
2024-02-12 12:35
DIA to SRM assay gradient
akhilabrai
2024-01-22 21:37
Nick Shulman
2024-02-08 07:24
When importing Agilent .D files is there a way to read the Sample Group information?
cian monnin
2024-02-05 13:17
cian monnin
2024-02-07 13:41
autoQC explicit retention time window
halwaseem
2024-02-06 10:26
Nick Shulman
2024-02-07 07:28
PDA Data in Thermo Raw File Prevents Skyline Import
ddrruss
2024-01-31 08:44
Nick Shulman
2024-02-06 16:21
Unable to import Spectra from Bruker DDA analysis.tdf or analysis.tdf_bin using BlibBuild
lubwen
2024-01-08 10:31
lubwen
2024-02-06 11:00
Different calibration curve concentrations and fittings for different molecules
cian monnin
2024-02-05 13:07
Nick Shulman
2024-02-05 13:28
DIA with overlapping windows, MSFragger output files, import peptide search creates Warning: Did not find spectrum
jennifer schwarz
2024-01-31 04:35
Nick Shulman
2024-02-02 15:26
Importing Thermo Biopharma Finder Search Results to Skyline
Yao Chen
2024-02-02 00:25
Nick Shulman
2024-02-02 10:23
Peak inversion over y-axis with new skyline version
dhaupt
2024-02-02 08:11
Nick Shulman
2024-02-02 08:28
Building a spectral library from Proteome Discoverer Output
r g beniston
2013-07-24 09:00
Nick Shulman
2024-02-02 07:22
Refine/Results/Max transition peak rank setting
Zac
2024-01-31 10:59
Nick Shulman
2024-02-01 13:13
GENERATION OF TRYPTIC PEPTIDE
vanyabangera
2024-01-28 06:01
vanyabangera
2024-01-30 20:25
Data processing on Skyline
nbekhti
2024-01-22 07:31
nbekhti
2024-01-30 17:45
isotopes/labeled forms not reported in mProphet command line export
Will Thompson
2024-01-30 11:44
Will Thompson
2024-01-30 14:39
Chromatogram information unavailable JUST for the Heavy Label
cvarcini
2024-01-30 11:41
Nick Shulman
2024-01-30 12:07
How to analyze Shimadzu .lcd files?
AWY
2024-01-19 21:37
Nick Shulman
2024-01-29 16:52
Merging calibration curve and samples measurements skyline files
ddkale chemistry
2024-01-29 01:52
Nick Shulman
2024-01-29 07:24
How to change the language from Chinese to English?
xx huang
2024-01-28 04:26
xx huang
2024-01-28 21:58
"Failed importing results...the calculator requires all targets list in order to determine a regression."
lh48280
2024-01-25 13:24
lh48280
2024-01-26 13:14
Import of data into Skyline
kuechler
2024-01-26 01:23
Nick Shulman
2024-01-26 12:16
unstable results importing, chromatograms only partially visible, again
warham
2024-01-25 15:07
Nick Shulman
2024-01-25 15:39
Interference peaks and peak tailing
thetrung126829412
2024-01-25 07:26
thetrung126829412
2024-01-25 09:42
Transition with precursor m/z in MS2
dhabaker
2024-01-23 06:44
dhabaker
2024-01-25 02:07
View chromatogram not available for all runs
bart van puyvelde
2024-01-24 04:54
bart van puyvelde
2024-01-24 07:43
Ion mobility settings using timTOF Bruker DDA data
Luisa Nieto Ramirez
2024-01-23 10:48
Juan C. Rojas E.
2024-01-23 14:55
Issues with import peak boundaries
Juan C. Rojas E.
2024-01-23 05:21
Nick Shulman
2024-01-23 09:47
Spectral library with .ssl format for wiff2
Thierry Schmidlin
2024-01-22 06:58
Brian Pratt
2024-01-22 08:11
AutoQC_Panorama
nbekhti
2024-01-22 07:22
nbekhti
2024-01-22 07:22
Reporter Ions - Just a thank you!
Juan C. Rojas E.
2024-01-20 06:33
Juan C. Rojas E.
2024-01-20 06:33
Collision Energy (CE) Optimization for PRM
minsu907
2024-01-19 10:28
Nick Shulman
2024-01-19 22:47
Development-
jm007@uw.edu
2024-01-19 15:41
jm007@uw.edu
2024-01-19 15:41
mass error (ppm) for peptides
kmsd
2024-01-19 12:42
Nick Shulman
2024-01-19 12:51
export intensity
1638393444
2024-01-19 08:41
Nick Shulman
2024-01-19 08:48
Import Failing
michele tinti
2024-01-18 04:49
michele tinti
2024-01-19 02:40
How to add glycostlation for o-and n-glycosylation on hte peptide sequence?
Jenny Albanese
2024-01-18 14:06
Jenny Albanese
2024-01-18 14:06
New version (V23) can't properly work on the data processing for CE optimization
hsiaoyc
2024-01-17 04:02
Nick Shulman
2024-01-17 06:57
About Skyline
saito-yurie
2024-01-16 04:31
Mike MacCoss
2024-01-16 08:26
Integration Help
pmj4
2024-01-16 07:52
Nick Shulman
2024-01-16 08:09
Missing transition peak areas
dhabaker
2024-01-08 08:56
dhabaker
2024-01-15 01:59
MRMHR on ZenoTOF for small molecules
viragsagikiss
2024-01-10 15:45
Nick Shulman
2024-01-11 06:45
Import DDA Peptide Search
s84063
2024-01-06 01:25
Juan C. Rojas E.
2024-01-11 01:29
Toggle off protein overlay information
Juan C. Rojas E.
2024-01-10 05:40
Nick Shulman
2024-01-10 07:02
Error in negative mode mzML file import
chang_he
2024-01-09 14:44
chang_he
2024-01-09 17:08
Peak normalization with iRT
c frampas
2024-01-09 07:52
c frampas
2024-01-09 08:10
Exporting protein name from proteome FASTA file.
jpbelair
2024-01-02 12:06
Nick Shulman
2024-01-08 12:02
modification of precursor m/z order in targets and results panels
heuillet
2023-06-16 04:51
Brian Pratt
2024-01-08 10:35
Exporting no retention time to transition list
Jeff Whiteaker
2024-01-05 10:57
Nick Shulman
2024-01-05 14:30
Importing peak bounderies
evy timmerman
2024-01-05 05:18
Nick Shulman
2024-01-05 13:39
Zooming not working properly
Tomas Vaisar
2014-02-19 08:32
matthew murphy
2024-01-05 11:14
Keyboard shortcuts for scrolling through targets
matthew murphy
2024-01-05 08:17
matthew murphy
2024-01-05 10:50
log2 scale for group comparison
hwang2
2024-01-04 07:30
Nick Shulman
2024-01-04 15:20
Fold change
ilaria palmisano
2024-01-04 07:22
ilaria palmisano
2024-01-04 11:08
Development MRM method from a high resolution MS data
oyku su yildirim
2024-01-04 03:02
Nick Shulman
2024-01-04 07:58
Why can't the predicted retention time be displayed?
caixue
2023-12-25 20:48
caixue
2023-12-26 18:44
Removing Redundant Transitions
eajarett
2022-11-28 14:07
bobxiong
2023-12-24 12:14