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How do I limit the RT window when use 'Apply Peak to All' functionqzhang312019-10-17Brendan MacLean2019-10-18
Real-time transfer of data to Skylinebenoit fatou2019-10-18benoit fatou2019-10-18
Absolute Quantification in Skyline for (Peptide/Protein)iej72019-10-18Nick Shulman2019-10-18
PRM Workflow with Spectral Matchingsa8252019-10-18Nick Shulman2019-10-18
Not possible to extract chromatograms from MGF filesmarc isaksson2019-10-17marc isaksson2019-10-17
Standard deviation in quant experimentsjulius fuersch2019-10-16Nick Shulman2019-10-17
issue_exporting sepctral lib.Wael2019-10-15Wael2019-10-17
iRT error when adding Protein Prospector generated blibanatoly.urisman@ucsf.edu2019-10-16anatoly.urisman@ucsf.edu2019-10-16
Question regarding DIA Isolation Window Scheme output for Thermo Fusion DIA m/z listdhardie2019-10-16dhardie2019-10-16
The error with cdb fileshin2019-10-09Brian Pratt2019-10-11
Missing MS2 from Mass Inclusion List.mwmann2019-10-10mwmann2019-10-11
MSstats analysis using ratio light:heavyTaina Marques2019-10-11Nick Shulman2019-10-11
Small Molecule Quan using light:heavy ratio without deuterated (heavy) version of each analyte (light)kbrady2019-10-08kbrady2019-10-10
Differnt product ions not shown together in SkylineFlorianBonn2019-10-10Brendan MacLean2019-10-10
Cannot import iProphet pepXML file to build a spectral librarymarc isaksson2019-09-24marc isaksson2019-10-10
Problem installing Skyline Dailyjoel federspiel2019-10-09joel federspiel2019-10-09
Skyline not recognizing Heavy Acetyl modification of lysine residuesdbade0012019-09-20dbade0012019-10-09
Skyline cannot import iProphet pepXML files to build a spectral library - if X!Tandem was used as a search enginemarc isaksson2019-10-07matt.chambers42@gmail.com2019-10-08
Q-TOF .raw data search stops after certain retention timeYao Chen2019-08-13matt.chambers42@gmail.com2019-10-07
How to normalize the peak area with b-gal peptidedrrenugoel2019-09-30Brendan MacLean2019-10-04
Calibration Curve Errors for Light:Heavy Ratiobwidner2019-10-04Nick Shulman2019-10-04
Failed Importing Results... Failed to Centroid Scanbwidner2019-10-02bwidner2019-10-03
Skyline-daily 19.1.1.248 importing (extracting product ion data) from only light peptide even though heavy & light are both in RAW filemlane2019-10-02Nick Shulman2019-10-02
Two-step normalizationroman sakson2019-10-02roman sakson2019-10-02
Group comparisonEnzo2015-08-11roman sakson2019-10-02
diaPASEF data analysisthsofia176812019-10-01Brian Pratt2019-10-01
Keyboard Shortcutsthomlau2011-09-16Allison Haase2019-10-01
problems during installzhengki2019-09-29Brendan MacLean2019-09-30
remove peptides that are not present in all replicatescontet2019-09-27contet2019-09-29
Raw files movedingo.wohlgemuth@mpibpc.mpg.de2019-09-28Nick Shulman2019-09-28
IS it possible to do PRM data analysis using skyline?ekramh19822019-09-26Mike MacCoss2019-09-27
how to upload chromatogramdrrenugoel2019-09-27Nick Shulman2019-09-27
Facing problem in instalingmchsahu2019-09-27Nick Shulman2019-09-27
PEAKS export for library buildingmauro galli2019-09-26Brian Pratt2019-09-26
No transitions visible since latest Skyline daily updatelena reimann2019-09-25Nick Shulman2019-09-25
LOD determinationdjlj12019-09-25Nick Shulman2019-09-25
Skyline won't import PD result filessa8252019-09-24Brendan MacLean2019-09-24
Easier visual for Heavy and Light inwaltteri hosia2019-09-24Nick Shulman2019-09-24
Heavy peptide as global or surrogate standardwaltteri hosia2019-09-20waltteri hosia2019-09-24
AutoQC- No existing files founddavis2019-09-20Vagisha2019-09-22
DDA --> PRM not workingsa8252019-09-19Brendan MacLean2019-09-21
Metabolomic isotope data- can only view chromatogram for the nominal masssarahmacpherson6762019-08-06sarahmacpherson6762019-09-19
Spectral library problem from MaxQuant search (no isotopic labels)Steve S2019-09-13matt.chambers42@gmail.com2019-09-19
Install Version 19.1.sandra maass2019-09-18sandra maass2019-09-18
Optimizing FAIMS on new Thermo instrumentsMartijn van Duijn2019-09-18Martijn van Duijn2019-09-18
Peak picking within a specified retention time range.wangqingok@gmail.com2019-09-11Brian Pratt2019-09-17
Export structural modification listio2019-09-17Brendan MacLean2019-09-17
Sciex analyst .wiff files fails to import showing: Object reference not set to an instance of an object.kamal2019-09-02kamal2019-09-16
Not able to see "library peak area" in peak areas-replicate comparisonMonica E2019-09-15Monica E2019-09-15
using external calibration curve?Cedric2019-09-09Nick Shulman2019-09-15
AVG DIATobi2019-08-06Tobi2019-09-15
i did not get standard deviation whiskers by doing --Transitions > Total. yes, I am looking for the standard deviation of the total.drrenugoel2019-09-10Brendan MacLean2019-09-14
Error building spectral libraries from Comet/percolator outputtimothy acker2018-05-23matt.chambers42@gmail.com2019-09-13
Transiton Results ReportKhizra2019-09-13Nick Shulman2019-09-13
PRM Quantification of Croos-linked Peptidesjulius fuersch2019-09-09julius fuersch2019-09-13
Spectral libraryNathan Manes2019-09-12Brendan MacLean2019-09-12
Batch import custom annotation settings and tracking chromatogram corrections.velasqe22019-09-12velasqe22019-09-12
Exporting all peaks and mass accuracy for chromatogramsthomas hopf2017-07-24dsullivan2019-09-12
Show Modified Sequence Missingromeally@jhmi.edu2019-09-11romeally@jhmi.edu2019-09-12
Unable add Panorama server in Skylineit-admin-team2019-09-11Nick Shulman2019-09-11
Standard addition calibration for small moleculeJ Larose2019-09-09Nick Shulman2019-09-11
Product Ion Selection Without Spectral Librarysa8252019-08-29Nick Shulman2019-09-09
Saving file to older version of skylinedsullivan2019-09-09Brendan MacLean2019-09-09
Mass error and isobaric peaks analysisVahid F2019-09-06Brendan MacLean2019-09-07
How to get standard bar on peakarea view by choosing group by conditiondrrenugoel2019-09-07Brendan MacLean2019-09-07
How to get peak in the upper right paneldrrenugoel2019-09-07Brendan MacLean2019-09-07
ion trap Bruker Dpucci biagio2019-09-06Brian Pratt2019-09-06
Calibration weighing errorsiwei chen2019-09-06Vahid F2019-09-06
Peptide ratios to standardsjohn.leszyk@umassmed.edu2013-04-12Vahid F2019-09-06
Normalization DIA TICdkueltz2015-03-16Nick Shulman2019-09-05
semi-automated removal of 'interfered' transitions?Jason Held2019-09-04Jason Held2019-09-04
Average the duplicates' XIC for quantitation972019-08-29972019-09-04
potential bug decoysTobi2019-08-30Brendan MacLean2019-09-03
Can employee in R&D of a commercial company use Skyline?george wang cal2019-09-03george wang cal2019-09-03
Create Background ProteomeRichard Lam2019-08-13Brian Pratt2019-09-03
Could Skyline delete disqualified transitions during importation?Yao Chen2019-09-03Yao Chen2019-09-03
small molecule support for Agilent Chemstation data filesdgmccaskill2019-08-08dgmccaskill2019-09-03
Importing raw data to skylinnfatoukane862019-08-31Brendan MacLean2019-09-03
missing gene names, potential bugTobi2019-08-30Tobi2019-09-02
Problems about install skyline 19 on Windows10?kaylee xu2019-09-01Nick Shulman2019-09-01
Drift time predictor training from SkylineRunnerAivett Bilbao2019-08-30Aivett Bilbao2019-08-30
Specify retention time in command line transition list?dsullivan2019-08-26dsullivan2019-08-30
local FDR/PEPTobi2019-08-19Tobi2019-08-30
Skylinedailyrunner.exe could not save .exp fileshridevi patil2019-08-28shridevi patil2019-08-29
Failed importing results filesandberg2019-01-22sandberg2019-08-29
overlap DIATobi2019-08-28Tobi2019-08-28
Import transition list with modifications that have not been pre-specifiedjoshuasmith2019-08-28joshuasmith2019-08-28
Peak quality scoreZac2019-08-27Zac2019-08-28
is there possible to improve modification types of skyline?spklongz2019-08-27Brendan MacLean2019-08-27
Multiple precursors per peptidesa8252019-08-27Nick Shulman2019-08-27
Close all chromatogramspier-luc plante 12019-08-26pier-luc plante 12019-08-27
Accurate Values for peak intensitysa8252019-07-23sa6602019-08-26
Not able to see libray ion in the result file and how to do the quantitation of the peaksdrrenugoel2019-08-23Brendan MacLean2019-08-24
CE method export for application in MassHunter controlling an Agilent 6490 instrumentazad2019-08-22azad2019-08-22
What's wrong with my Thermo RAW filessolis2019-08-19matt.chambers42@gmail.com2019-08-22
Issue importing waters RAW files, Unhandled Exception: Invalid Function TypeAllison Haase2019-08-19matt.chambers42@gmail.com2019-08-22
Unable to process chromatograms for the moleculechinmaya k2019-08-11Nick Shulman2019-08-20
Order by document settingsmcqueen p2019-08-19mcqueen p2019-08-20
Using Skyline to monitor glycopeptides in DIArmeccariello2019-08-13Brendan MacLean2019-08-17
ssl search results not being importedsolis2019-08-16Nick Shulman2019-08-16