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extract chromatograms from tims TOFtleonova2021-06-18Brendan MacLean2021-06-18
Skyline failure_metabolomics_methods containing high number of transitionsanna illiano2021-06-18Brian Pratt2021-06-18
no files detected during import of library from fragpipekguehrs2021-06-15matt.chambers42@gmail.com2021-06-18
Comparing Peak Scoring / Sample Specific Peak Scoring Modelspeter r mosen2021-06-17Nick Shulman2021-06-17
More proteins shown than library in SWATH analysisheyang2021-06-16heyang2021-06-17
Crosslinking Quantificationswatibanerjee0602021-06-04Nick Shulman2021-06-17
Skyline command runner fails to write the exp file.shridevi patil2021-06-17Brendan MacLean2021-06-17
Skyline runs quite slow in extracting chromatograms from DIA raw filesref p2021-06-14Brendan MacLean2021-06-16
Can we do LFQ analysis in Skyline?shelkarmicrobio235912021-06-14shelkarmicrobio235912021-06-15
Creation of spectral library using DIA without DDAmjgou2021-06-15Brendan MacLean2021-06-15
about Edit Reportminyg982021-06-14minyg982021-06-14
Retention time decimal placemuluneh2021-06-14muluneh2021-06-14
Peak Integrationmuluneh2021-06-10muluneh2021-06-14
Error while installing LipidCreator via Skyline Toolskomal kedia159182021-06-14Nick Shulman2021-06-14
Unable to see isotopes in blue while checking Spectral library BLIBorynbek azhar2021-06-10Nick Shulman2021-06-14
Request: Visualize reporter ions in "Library Match" windowJuan C. Rojas E.2021-06-11Juan C. Rojas E.2021-06-14
Specifying height and width of chromatogramsjaltman2021-06-11Brendan MacLean2021-06-13
small molecule sMRM - chromatogram information unavailablepaul leonhardt2021-06-09paul leonhardt2021-06-11
An error occurred attempting to export. the mobility range 0.775548 - 0.829034 is not within the limits 0.780000 - 1.600000akshada gajbhiye2021-06-10akshada gajbhiye2021-06-11
peptide sequences - Goserelin, Ipamorelin, Desmopressinheather eastwood2021-06-10Brendan MacLean2021-06-10
Skyline for peptide search using Waters MSe dataywu12021-06-07Brendan MacLean2021-06-09
Linear fit in log spaceschen192021-06-08schen192021-06-09
about ms/ms filteringminyg982021-06-06minyg982021-06-08
Regex filter tabaf12342021-06-07af12342021-06-08
SearchLinwei Li2021-06-07matt.chambers42@gmail.com2021-06-07
about ms/ms filteringminyg982021-06-07minyg982021-06-07
Error with method export for SCIEX QTOF after upgrade to Analyst TF 1.8.1stephan kamrad2021-06-03Brendan MacLean2021-06-04
optimization for small moleculecarlos penno2021-06-03Brendan MacLean2021-06-04
in silico trypsin digestion from a FASTA filenicolas drouin2021-05-27nicolas drouin2021-06-03
Spectral Library Building – Option: Filter for document peptides Failspeter r mosen2021-06-02Kaipo2021-06-02
Skyline-daily (64-bit) 21.0.9.139 (6dbba07d9) cannot load the library.tsv file from EasyPQPfcyu2021-06-02Kaipo2021-06-02
Having Issues with Chosen Peaks Being Removedkaitlyn b donohoo2021-06-01Nick Shulman2021-06-01
Chromatogram information unavailablem anna monika2021-06-01Brian Pratt2021-06-01
MSfragger splib to blib?dkueltz2021-05-31dkueltz2021-06-01
File Not Reopening After Saving and Exiting the Programkaitlyn b donohoo2021-05-28Brian Pratt2021-05-28
how to perform unspecific enzyme digestionhui-song pak2021-05-28Brendan MacLean2021-05-28
Skyline export to ChromeleonAndrew2021-05-12Brian Pratt2021-05-28
Export method to MassLynx 4.2 versiondanielacgranato2018-11-27neil macdonald2021-05-27
impossible to read wiff2 filesnicolas drouin2021-05-27Nick Shulman2021-05-27
comparison between groups with heavy peptides spikedio2021-05-06io2021-05-26
Can a differential protein be validated by PRM measurement of a single peptide?alima2021-05-05Brendan MacLean2021-05-25
eliminating contaminated fragment ions in DIA processingTomas Vaisar2021-05-25Tomas Vaisar2021-05-25
Unable to build spectral library and import resultsS.K.2021-05-25Kaipo2021-05-25
Importing daughter scan data from a Xevo TQ-Smatthew daly-32021-05-11matthew daly-32021-05-25
Missing Graph Legendalaine garrett2021-05-24Nick Shulman2021-05-24
MSP Spectral Library import for small molecules failedstolltho@gmail.com2020-05-17Brian Pratt2021-05-21
Peptide integrated peak area ranking filteringboycea2021-05-21Brendan MacLean2021-05-21
Spectral library explorer - question/suggestion about search functionality for small moleculesEmmanuel2021-05-20Emmanuel2021-05-20
about pq500 analysis templateminyg982021-05-20Brendan MacLean2021-05-20
How to define your quantifier fragment ionOrla Coleman2021-05-20Nick Shulman2021-05-20
Library matchingatable2021-05-20Brian Pratt2021-05-20
DIA-NN .speclib supportTobi2020-05-27f capuano2021-05-20
Invalid cvParam accession 200000854anita liu2021-05-18anita liu2021-05-19
export to pdfdwebb2021-05-19Brendan MacLean2021-05-19
difference between normalization methods in group comparisonLinwei Li2021-05-18Nick Shulman2021-05-18
differences in the volcano plot data generated from skylineLinwei Li2021-05-02Linwei Li2021-05-18
L/H Area Ratio Mismatchgermolus2021-05-17germolus2021-05-18
Issue with Library creation using DIA-NN based 'report-lib.tsv' file (SPECLIB file type)abhinav bioc12132021-05-13matt.chambers42@gmail.com2021-05-17
Waters SONAR data conversion for use in EncyclopeDIAdavid schmidt2021-05-11Brian Pratt2021-05-14
Does Skyline support auditing and User password restriction to lock down analytical methods ? Is also GLP / GCP ?capocherokee245002021-05-13Brendan MacLean2021-05-13
Does Skyline perform RT alignment of EI-GC-MS chromatograms spiked-in with deuterated internal standardscapocherokee245002021-05-11Brendan MacLean2021-05-13
Error library-free analysissstoychev2021-05-13sstoychev2021-05-13
How does skyline handle the origin when performing calibrationjrenders2021-05-13Brendan MacLean2021-05-13
Mismatch in PPP for experiment file viewed in Mass Lynxkartik kundgol2021-05-13Nick Shulman2021-05-13
Collision Energy Optimisation on Agilent Ultivo QQQa grayson2021-04-12Nick Shulman2021-05-13
Running peptide search with MsAmanda from commandlinefcsigloch2021-05-12Brendan MacLean2021-05-12
Skyline not compatible with Shimadzu LCMS-8060William2021-04-19Nick Shulman2021-05-12
Error with MSstats_Bruderer.R scriptdayne02082021-05-12Nick Shulman2021-05-12
ERROR: Error in SkylinetoMSstatsFormatdayne02082021-05-07dayne02082021-05-12
Kalibrierkurve für die Linearität erstellenalexandria balac2021-05-11Brendan MacLean2021-05-11
DDA to DIA (MSE) Peak Peaking ErrorsJuan C. Rojas E.2021-05-06Juan C. Rojas E.2021-05-11
Normalization method ratio to heavyio2021-05-10Nick Shulman2021-05-10
Error message when trying to copy and paste phospho peptides from one file into another filerschoenh@fhcrc.org2018-11-08Nick Shulman2021-05-07
Skyline Batch Downloadheyang2021-05-04alimarsh2021-05-05
DIA-NN SupportShawn Rice2021-05-05Shawn Rice2021-05-05
Skyline is slow on my computercmwats22021-05-03cmwats22021-05-05
How To Delete Replicates?dperez26972021-05-05dperez26972021-05-05
"Missing" Transitionsgermolus2021-05-04germolus2021-05-04
iRT peak pickinpicking wrong peak of some replicates)boycea2021-05-03Nick Shulman2021-05-04
Is BlibSearch still supported?Chris Ashwood2021-05-03Chris Ashwood2021-05-03
another Skyline install problemkvancott22021-05-01Nick Shulman2021-05-03
Feature Score Generations Fails: “Signal to noise missing from chromatogram peak” for particular replicatespeter r mosen2021-05-02Nick Shulman2021-05-03
Problem importing Brucker Tims-TOF Pro data in docker containerm j noga2021-04-23m j noga2021-04-30
Unable to convert .wiff format file to mzml formatsumukha hegde72021-04-30Nick Shulman2021-04-30
Quantifying with surrogate standardsJoerg2020-11-24Nick Shulman2021-04-29
Skyline for Lipidomicsaravandi2021-04-27aravandi2021-04-29
Spectral library building with open source/free MS/MS identification softwareErik2021-04-21Erik2021-04-29
Spike of heavy peptidesnicolas pierre2021-04-21Brendan MacLean2021-04-26
Slack support groupszymanski210712021-04-23szymanski210712021-04-26
How to open a spectra in skyline?qwa2272021-04-23Nick Shulman2021-04-25
Adding TMT ions to product ions in Skyline 20.2juliane weisser225972021-04-21juliane weisser225972021-04-23
MS Amanda ScoresJoerg2021-04-23Joerg2021-04-23
Does Skyline can evaluate digestion efficacy of enzymes?ref p2021-04-15Mike MacCoss2021-04-21
Isolation list export for Orbitrap Exploris 480itv0052021-04-21itv0052021-04-21
Exporting prm-PASEF methodmeth2021-04-16meth2021-04-20
Installing/enabling external tool in Administrator install of Skylinem j noga2021-01-14m j noga2021-04-20
FAIMS PRMmaria hernandez-valladares2021-04-15maria hernandez-valladares2021-04-20
SCIEX TripleQuad 7500 wiff2 import errorroosso2021-04-19roosso2021-04-19
Skyline occupies 100 % of CPU during DDA searchm kuppusamy2021-04-19m kuppusamy2021-04-19
Problem with error model from mProphetSangram2021-02-16Nick Shulman2021-04-19