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Correct spectrum selection for non-redundant libraryJuan C. Rojas E.2020-09-30Juan C. Rojas E.2020-09-30
Broken compatibility with Shimadzu LCMS 8050 after replacing Shimadzu DataReader with IoModule for MRM filesPawel2020-09-30Pawel2020-09-30
Skyline CMD helpsmanda2020-08-13Kaipo2020-09-29
Retention time recognized in sec formatKhang Huynh2020-09-29Khang Huynh2020-09-29
Broad mass range for peak extractionharald schoeny2020-09-18Brendan MacLean2020-09-29
Problem in building of spectral libraryarvindverma00782020-09-29Nick Shulman2020-09-29
Reduction in the number of true peptide identification as the number of DIA raw files increases in the spectral library searchChinmaya k2020-09-28Chinmaya k2020-09-28
Missing light product ions in SureQuant experimentcarmen.gonzaleztejedo2020-09-28Nick Shulman2020-09-28
Custom iRT peptidesbenoit fatou2020-09-24Kaipo2020-09-28
Crosslink search from Mascot to create library for Skylinesandberg2020-08-05Brendan MacLean2020-09-28
DIA 3-plex SILACtrinidad martincampos2020-09-27Nick Shulman2020-09-27
How did skyline read the OpenSWATH results?andyzcq@gmail.com2020-09-19matt.chambers42@gmail.com2020-09-25
Oxonium ions for MRM glycan analysisgiulia lambiase2020-09-24Brian Pratt2020-09-24
Skyline-daily Program Won't Openehubb0042020-09-22ehubb0042020-09-23
Retention time selectionojulien2020-09-17ojulien2020-09-23
Waters Method Export Failure (Masslynx 4.2 SCN986)Will Thompson2020-09-23Will Thompson2020-09-23
Export method to MassLynx 4.2 versiondanielacgranato2018-11-27danielacgranato2020-09-22
Cannot Roundtrip Small Molecule Transition Listdamien ready2020-09-17Brian Pratt2020-09-18
Comments need to be deletedmattkarasu2020-09-11Christopher Johnstone2020-09-16
Extracting MS1 peak area for peptides of known mass from DDA/bbCID experimentsMus2020-09-14Nick Shulman2020-09-15
support in Shimadzu LabSOlutions LCMS 5.99 SP2Stephane MOREAU2020-08-28matt.chambers42@gmail.com2020-09-15
Prosit Server UnavailibilityChinmaya k2020-09-14Nick Shulman2020-09-14
error building Prosit librarybin fang2020-08-28Brendan MacLean2020-09-10
Cannot fill in Protein Description field in 'Edit>Insert>Peptides'shaoen2020-09-09Brian Pratt2020-09-09
System.IO.IOException: ERROR: Error parsing modifications file: modifications.xml(line 5662): Missing required attribute 'composition'.m kuppusamy2020-09-09m kuppusamy2020-09-09
issue when importing peptide search from a MaxQuant msms.txt file - ignored modificationsmarie locard-paulet210612020-09-08marie locard-paulet210612020-09-08
Bibliospec for spectral library searchingdavid morgenstern2020-09-06Nick Shulman2020-09-08
bibliospec errordkueltz2020-09-05dkueltz2020-09-08
Peaks not foundjessica medina2020-08-27jessica medina2020-09-08
Question about calculating standard errors of mean and CVs for group comparisonroman sakson2020-09-06roman sakson2020-09-07
Array dimensions exceeded supported range error on DIA .raw file import - ELIB from EncyclopeDIAcabarnescabarnes2020-09-05Nick Shulman2020-09-05
MS/MS Spectrum screenjfarrera2020-09-04Nick Shulman2020-09-04
Spectral library exportJuergen2020-09-02Juergen2020-09-03
Wrong position of amino acids?fcsigloch2020-01-13Brendan MacLean2020-09-02
Small molecules Bracketed calibration and data consolidationanders honore2020-09-02Nick Shulman2020-09-02
Spectrum missingcunain1gx2020-08-31Nick Shulman2020-09-01
Small molecule (non-global) standard concentrationsjrenders2020-09-01jrenders2020-09-01
Isotope labels on some residueVincent Lacasse2020-08-31Vincent Lacasse2020-08-31
Error when copy + pasting a peptide list into Skyline dailyroberthardt2020-08-28Nick Shulman2020-08-31
Stable isotope tracing experiments: Is is possible to change the order of isotopologues in the peak area replicate comparison?Michi2020-08-27Michi2020-08-27
peak integrationmonasharar2020-08-26monasharar2020-08-27
Problems with import of peak boundaries in smallmolecule mode for .wiff dataMax2020-08-24Nick Shulman2020-08-25
DDA Spectral Library building from Thermo Lumos ,sray2020-08-24Nick Shulman2020-08-25
DIA overlap with margin demultiplex in MSConvertraghuram2020-08-24raghuram2020-08-24
IMS Predictor questionsJuan C. Rojas E.2020-08-21Brian Pratt2020-08-21
Export of Transition List and Method for Sciex 6500+ brokenWill Thompson2020-08-19Brian Pratt2020-08-21
How can I select endogenous peptides not spiked-in iRT peptides for RT nomalization in Skyline?andyzcq@gmail.com2020-07-23Kaipo2020-08-21
Applying manual integration windows when adding new transitions/fragments for an existing compound in TargetsEmmanuel2020-07-27Juan C. Rojas E.2020-08-21
MS Amanda DDA searchsstoychev2020-08-21sstoychev2020-08-21
Skyline and QTRA6500-CE and DP optimization method exportqin fu2020-08-19Kaipo2020-08-20
Retention time shiftyulun2017-04-28bryna fitzgerald2020-08-19
DIA TIC does not match DDAMark Athanason2020-08-14Mark Athanason2020-08-16
Calibration curve X axis Analyte Concentration/Light:Heavy con ratioZac2020-08-14Zac2020-08-14
Skyline not recognizing in house Labkey server as 'Panorama server'mlane2020-08-13mlane2020-08-14
An error occurred attempting to install Skylineshobhabr202020-08-12Nick Shulman2020-08-13
Feature detection capability for small moleculesFC2020-08-13Nick Shulman2020-08-13
Peaks integration with different boundaries between light and heavyAnne Incamps2013-11-06nicolas pierre2020-08-12
Exclude counting of decoys from prot, pept, precurs, transitions numbers in target listdkueltz2020-08-06dkueltz2020-08-07
(Loss of) resolving power when importing mzXML files from HRAM QTOFanders honore2020-08-04anders honore2020-08-07
PTM annotationrajirathore32020-08-06rajirathore32020-08-06
Assigning peak colors for small molesculessarah williams2020-08-06Nick Shulman2020-08-06
Prosit - errorIhor2020-08-06Ihor2020-08-06
Software crashing while importing result filesalaine garrett2020-08-05Brendan MacLean2020-08-06
Max LOQ bias calculationZac2020-08-06Zac2020-08-06
Manuscript on Biotin Acceptor Peptideakulyyasov2020-08-06akulyyasov2020-08-06
Issue downloading skyline dailywlstutts2020-08-05Nick Shulman2020-08-05
Ion Mobility Window Type settings with Bruker timsTOF dataSebastian Winter2020-08-05Kaipo2020-08-05
Waters HDMSE Raw Data Visualizationbrad williams2020-04-13Brian Pratt2020-08-05
Time - course analysis: data exportdavid morgenstern2020-08-04Nick Shulman2020-08-04
Skyline truncating small molecule peaks that appear to have more data...jrenders2020-07-17jrenders2020-08-01
SMILES InChi in ReportsChristina lucas2020-07-27Christina lucas2020-07-30
LC-MS/MS data file input for Skyline 20.1.0.155avaldiviezo2020-07-29Nick Shulman2020-07-29
Skyline Access Errordiana saggese2020-07-29Brendan MacLean2020-07-29
ERROR: illegal character _ found in sequence [xxxxxxxx].... (line xxx)siljebt2020-07-26siljebt2020-07-26
histone quantificationmariette matondo2020-07-22Mike MacCoss2020-07-23
Intermittent Error: Could not connect to Skylinemmarx2020-07-22Vagisha2020-07-23
Proteomics data processing into sample vs protein intensity matricessaharak2020-07-19andyzcq@gmail.com2020-07-23
AutoQC upload on Panorama issueCedric2020-07-21Cedric2020-07-22
small feature improvementTobi2020-07-13Chris Ashwood2020-07-22
failed attempting to check for an updateandyzcq@gmail.com2020-07-21andyzcq@gmail.com2020-07-22
Isotope ([M+1], [M+2])dbergmann2020-07-22Brendan MacLean2020-07-22
Avoidance of missed cleavages, methionine, cysteineddickerson2020-07-20Brendan MacLean2020-07-20
Base Peak not showing in 20.1.0.155 but visible in 4.1.0.11714H.Schmidt2020-07-20Brendan MacLean2020-07-20
Peak area of molecular contaminant during specified time windowlbergluecke2020-07-17Brian Pratt2020-07-17
Skyline document with cross-linked peptidesdanielacgranato2020-06-27Nick Shulman2020-07-17
Transition export for small molecule CE optimization not workingstolltho@gmail.com2020-07-14stolltho@gmail.com2020-07-15
Export Peak Areas light and heavy separatecamiel aarents2020-07-15Nick Shulman2020-07-15
Top 5 quantitationswg422020-07-15Nick Shulman2020-07-15
Identifying proteinsp pereira792020-07-14Brendan MacLean2020-07-14
Error MSConvert demultiplexingwendy white2020-07-09wendy white2020-07-14
Maintaining Integration Windows When Re-importing Datameyermr@wustl.edu2014-02-28Brendan MacLean2020-07-13
iRT regression based failure to import DIA runskguehrs2020-07-09kguehrs2020-07-13
Making libraries for synthetic peptides and packaging them into single file in skylineSRS2020-07-07Tobi2020-07-13
Quantifying on multiple fragment ion isotopic peaksjohan gobom2020-07-08Brian Pratt2020-07-09
Bug in document grid reportingjmeyer2020-07-08jmeyer2020-07-08
Failed to export method for CE optimizationbenoit fatou2020-06-08Kaipo2020-07-07
TMT0 Labeled Peptide as Internal Standard for TMT10 Targetsdrothenberg2020-07-07drothenberg2020-07-07
QuaSAR Errormsj05062020-07-06msj05062020-07-06
Calibration curve calculations problems.monika lysakowska2020-07-06Nick Shulman2020-07-06
Install issueBrett Phinney2018-01-30nicknuar2020-07-03