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DDA file without target peptidegaohuanhuan2019-06-18gaohuanhuan2019-06-18
strange behaviour of unique peptides table checkmarksTobi2019-06-18Tobi2019-06-18
Feature Request Sequence Dependent Precursor Chargesroman sakson2019-06-13Tobi2019-06-17
Importing result from TimsTOF (TDF forrmat)m anna monika2019-05-24Brian Pratt2019-06-17
DIA samplesgeweigang2019-06-16Brendan MacLean2019-06-17
Displaying peptide mod in left target sequencesErik de Graaf2019-06-17Erik de Graaf2019-06-17
Using colors to mark peptide/precursors for reviewErik de Graaf2019-06-17Erik de Graaf2019-06-17
Keyboard Shortcutsthomlau2011-09-16Erik de Graaf2019-06-17
mzid file contains unknown score type ERRORShawn Rice2019-06-12matt.chambers42@gmail.com2019-06-14
how to import TraML file into skyline?caixue2019-06-11caixue2019-06-13
Combining own DDA library with SWATHatlas librarySanL2019-06-11Nick Shulman2019-06-12
Adding a water loss product ionjoe.palandra@pfizer.com2019-06-11joe.palandra@pfizer.com2019-06-11
Fail to install Skylineyueliangwias2019-06-11Brendan MacLean2019-06-11
SkylineRunner not importing RAW filesschen192019-06-07schen192019-06-10
New to Skyline: Searching for specific MS2 ionsirahman22019-06-10Brian Pratt2019-06-10
Import ms2 ion transition listdavidz2019-05-28davidz2019-06-07
Reintegration following model training failsmatthew.r.russell@manchester.ac.uk2019-06-07Brendan MacLean2019-06-07
using one peptide calibration curve to quantify another peptideana2019-06-06ana2019-06-07
dotp labelstephen swatkoski2019-06-06Nick Shulman2019-06-06
How to edit peak picking in AutoQC?danielacgranato2019-06-06Brendan MacLean2019-06-06
reverse external calibration curveschiva cristina2018-04-26tobias.kockmann@biol.ethz.ch2019-06-06
Importing pepXML, mzid, or mzTab from OpenMS in Skylinelparsons2019-04-16matt.chambers42@gmail.com2019-06-05
Unable to select charge state 2+melechco@gmail.com2019-06-04melechco@gmail.com2019-06-04
Tutorial: MS1 Full-Scan Filtering problemsj dabrowski2019-05-27j dabrowski2019-06-04
Error when importing raw filedavidz2019-05-29Nick Shulman2019-05-31
Pepsin cleavage sitesstefan ehling2019-05-31Brendan MacLean2019-05-31
Which MS1 trace is imported in thermo data?michelle dubuke178462019-05-31michelle dubuke178462019-05-31
Error: Library File cannot be opened for transferringtes10272019-05-30tes10272019-05-30
Peak Picking Model for Small Moleculeshogan2019-05-28Brian Pratt2019-05-30
Not able to get report using SkylineDailyRunnerveerupaksh2019-05-29veerupaksh2019-05-30
centroided or orbitrap?qiyingziamms2019-05-29qiyingziamms2019-05-29
Peptide library building from MaxQuant.luzjpaulo2019-05-20luzjpaulo2019-05-29
Thermo Altis Collision Energy Optavizrosenberg2019-05-21Brendan MacLean2019-05-29
Correct peaks not picked by Skylinewen ding2019-05-27wen ding2019-05-29
Questions on baseline intensity and peak callinglparsons2019-05-07lparsons2019-05-29
Add optimized CE's to peptides in the Skyline documentAstrid Guldbrandsen2019-05-27Brian Pratt2019-05-28
Message "missed 1"plemignot2019-05-28Brian Pratt2019-05-28
Failed Importing resultnr4122019-05-28nr4122019-05-28
There is no dotted line for peak selectiondaisy00252019-05-27Nick Shulman2019-05-27
Another "Chromatogram information unavailable' problemSanL2019-05-24SanL2019-05-24
Integration thresholdlzhangok2019-05-22Brian Pratt2019-05-23
Colour coding of Peptides and transitionsnr4122019-05-22nr4122019-05-23
Exporting p, q, or e values in Peptide Quantification Report?lparsons2019-04-24Brendan MacLean2019-05-22
Isotopes via Insert Small Molecule Transition ListFabian2019-05-16Brendan MacLean2019-05-22
Retention Time Calibration for DIA-datayb776182019-05-17Brendan MacLean2019-05-21
Issue with Recognizing User Created Modificationdwwilk022016-05-27trinidad martincampos2019-05-17
Small Molecule Zero Peakbwidner2019-05-16bwidner2019-05-16
Export method to MassLynx 4.2 versiondanielacgranato2018-11-27neil macdonald2019-05-16
creating peptide library from uniprot database humansponce12019-05-13sponce12019-05-15
MS1 Quantification of Precursor Ionsbrown4592019-05-15brown4592019-05-15
combined MS1 PRM no product ion chromatogramsmohammad abukhalaf2019-05-10mohammad abukhalaf2019-05-14
RT prediction not shown for all peptides/samplesssaleh2019-05-13Nick Shulman2019-05-13
Try to set different collision energy for different daughter transitions of a compoundyufeng li182019-05-13Brian Pratt2019-05-13
Webinars VisualizationGioMag2019-05-09GioMag2019-05-13
Library build error (dat file)Jason Held2019-02-14shannon holt2019-05-10
Dimer peptidechanchalmrt2019-05-09Mike MacCoss2019-05-09
small molecules: normalized retention time (iRT)alessio maiolica151182018-07-02Brian Pratt2019-05-09
Include fragment ion annotation when "Copy Data" from Library Match tabjonasbecker2019-05-08jonasbecker2019-05-08
Viewing Products from DDAbwidner2019-05-07bwidner2019-05-07
Targeted MS/MS importing - cutting off ID'd peakskvancott22019-02-12bwidner2019-05-07
Failure opening Skyline Sessionaline doerrbaum2019-05-06aline doerrbaum2019-05-07
No precursor ion chromatograms foundbwidner2019-04-30bwidner2019-05-06
Import of report templatesstoychev2019-05-06Brendan MacLean2019-05-06
Spectral library essential in Skyline for the generation of optimum MRM methodshobhabr202019-05-03Brendan MacLean2019-05-06
Calculate the confidence score and q-value for searched peptidessunbergsoon2019-04-30sunbergsoon2019-05-06
Getting The operation has timed out.kartik kundgol2019-05-05kartik kundgol2019-05-06
Modified Sequence Full Names - apparent bugNathan Manes2019-04-29Nick Shulman2019-05-03
Small molecule method exportmcarey172018-12-03Brendan MacLean2019-05-02
Failure imorting mzXMLcfarnsworth2019-05-02Brendan MacLean2019-05-02
Failure to import MS1 filtered datasstoychev2019-05-02Brian Pratt2019-05-02
Shimadzu Triple Q data in Skylinet j f m voermans2019-04-29t j f m voermans2019-05-02
Unable to generate calibration curveso mannion52019-05-01Nick Shulman2019-05-01
Collision Energy on QExactivelisa.j.zimmerman@vanderbilt.edu2013-10-23Brendan MacLean2019-05-01
Issues with downloading Skylineddoza2019-04-30Brian Pratt2019-04-30
System.IO.IOException: ERROR: Illegal character p found in sequence .....jason a macgurn2019-04-15matt.chambers42@gmail.com2019-04-29
save pivot in Report template .skyrsarah lennon2019-04-25sarah lennon2019-04-25
Any plans for a Linux version of Skyline (even with limited capabilities)?lparsons2017-08-07Brendan MacLean2019-04-25
some peptides show incomplete peakslvyayao902019-04-23Brendan MacLean2019-04-25
Retention time difference in library when using PDresult vs. msf fileroberthardt2019-04-23matt.chambers42@gmail.com2019-04-25
Error importing Bruker xmlfcsigloch2019-04-23matt.chambers42@gmail.com2019-04-25
SkylineDailyRunner.exe error via Symphonysarah lennon2019-04-24sarah lennon2019-04-24
SD Rat PlasmaRichard Lam2019-04-23Nick Shulman2019-04-24
MS1 filtering - library peptidemmr6q2016-02-17Brendan MacLean2019-04-23
Do we need to add the iRT standards to each fractions when building the library?zzhang92019-01-21anatoly.urisman@ucsf.edu2019-04-20
peptide count from document grid plus pivot not counted correctlysas282019-04-18sas282019-04-19
Retention Time of the Unknownqaporter2019-04-18Brendan MacLean2019-04-18
Retention Time of the Unknownqaporter2019-03-15Nick Shulman2019-04-18
SMALL MOLECULE TRANSITION LISTjmr2019-04-18jmr2019-04-18
Vertical blue ID lines without any library matchroberthardt2019-04-17Brendan MacLean2019-04-18
Cannot Import Top5 Data from a QExactivekhader awwad2019-04-18Nick Shulman2019-04-18
Chromatogram unavailable issueBo An2019-04-15Bo An2019-04-17
Isobaric labeling in small moleculesJuho2019-04-16Juho2019-04-16
Export of Scan Indexesjfoe2019-04-16jfoe2019-04-16
Unclear Peaks in Skyline for Heavy Labelled PRMssa8252019-03-24Nick Shulman2019-04-16
File text/Free text column into document grid?waltteri hosia2019-04-16Nick Shulman2019-04-16
Unexpected Argumentkartik kundgol2019-04-15Nick Shulman2019-04-15
calibration curve with spiked ISTD for multiple peptidesDeWi2019-03-29Nick Shulman2019-04-15
Import a precursor isotopes transition listdavidz2019-04-09davidz2019-04-15
Shimadzu Library file not loadingAlan Barnes2019-04-08Brian Pratt2019-04-15
NIST mps phosphopeptide library issueanne-christine uldry2019-04-03Brendan MacLean2019-04-13