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Error installing skyline daily unplugged version.Niyatti2021-09-17Niyatti2021-09-18
How can I expand the RT range in the peak profile windowmmr6q2021-09-17Nick Shulman2021-09-17
Small Molecule Method Development and CE OptimizationPrintcarlos penno2021-09-16Nick Shulman2021-09-16
problem installing Skyline 21.2-64 bitNiyatti2021-09-15Niyatti2021-09-16
Import Peptide Search - No spectra in libraryclaire tonry2021-09-15Nick Shulman2021-09-15
Import Peptide Search: Search Failedkmp952021-09-15kmp952021-09-15
How to do normalization by 3 heavy compound for 3 more compoundsxue shi2021-09-14Nick Shulman2021-09-14
Division of transitions when multiple methods exportedOrla Coleman2021-09-09Brendan MacLean2021-09-13
Any plans for a Linux version of Skyline (even with limited capabilities)?lparsons2017-08-07dsullivan2021-09-13
Fragpipe tutorial hangs upani2021-09-09Brian Pratt2021-09-10
target per frameAntoine2021-09-07Kaipo2021-09-09
Failed importing DIA-PASEF results and isolation schemesmsielaff2021-09-02msielaff2021-09-09
Error building spectral library from MSFragger Search with timstof dataclaire tonry2021-09-07Nick Shulman2021-09-07
Exporting phosphopeptides from MaxQuant into Skyline to visualize phospho spectrumNiyatti2021-09-03Nick Shulman2021-09-03
DIA Umpire errorFrancis Beaudry2021-07-08Nick Shulman2021-09-03
Multiple peptides EIC chromatograms display valueJuan C. Rojas E.2021-09-03Nick Shulman2021-09-03
Error exporting method for Waters Xevo from Skylinecmboot2021-09-01Nick Shulman2021-09-01
Using R script in Skyline Batchschen192021-08-27schen192021-09-01
Retention time decimal placemuluneh2021-06-14muluneh2021-09-01
Automatically import transitions list from Waters triple quandrupoles RAW filesgioele visconti2021-08-20gioele visconti2021-08-31
QUantificationpriscillia lagoutte2021-08-31Nick Shulman2021-08-31
Peak summary data outdated on ms data reimportjfoe2021-08-26jfoe2021-08-30
Icon for Skyline 64 bit Admin version is not seen in Start->Programsshobhabr202021-08-27Nick Shulman2021-08-27
Failure attempting to modify the Skyline document with SWATH spectral library search dataChinmaya k2021-08-25Chinmaya k2021-08-26
Peak Annotation with a selected/forced time frameStephan Klatt2021-08-25Kaipo2021-08-26
Integrate all MS files over a user defined exact retention time window (peptideslucasm72021-08-26lucasm72021-08-26
Easier way to edit IM windows for prm pasef method generationaf12342021-08-26Brian Pratt2021-08-26
pep identification in DIA analysisheyang2021-08-18heyang2021-08-25
Error Importing Transition List: # of fields not picking up?jana carpenter72021-08-25Brian Pratt2021-08-25
problems in creating new equation for CEamanzoor2021-08-23amanzoor2021-08-25
Regarding the output of PREGO for a list of peptides from skylineshu upadhyay212021-08-23shu upadhyay212021-08-23
Failed to install the Skylinexguo2021-08-23Nick Shulman2021-08-23
Point mutations?mnt2021-07-28Kaipo2021-08-23
Forward compatibility in Skyline versionsLiyan2021-08-18Liyan2021-08-20
Negative Polarity Exportphilip remes2021-08-19Kaipo2021-08-19
Question New Protein Abundance Report Featureroman sakson2020-10-12roman sakson2021-08-17
no calibration curve shown for one analyte but others have itlaura.dubois@duke.edu2021-08-16Nick Shulman2021-08-16
Different dotp value in peak area view and target windowmeharunnissakohli2021-08-13Brendan MacLean2021-08-13
Ion mobility and mProphet scoringhets2021-08-11hets2021-08-13
DIA Umpire errorkongdezhi2021-07-12matt.chambers42@gmail.com2021-08-12
Mirrorplotting measured MS/MS spectra against library spectra?lackmann2021-08-11lackmann2021-08-11
Statistics for lipidskomal kedia159182021-08-11Nick Shulman2021-08-11
"Peak Areas" graphk valgepea2018-05-23roman sakson2021-08-11
MS Stats with heavy peptidesio2021-08-11Nick Shulman2021-08-11
Error when loading Waters TQ-S datalaura.dubois@duke.edu2021-08-10Nick Shulman2021-08-10
Missing fragment results for precursors with fully permuted isotope labels which have the same massstephan kamrad2021-08-10stephan kamrad2021-08-10
Optimization library for both collision energy and compensation voltagechi nguyen2021-07-29Kaipo2021-08-05
one point quantificationdms732021-08-05Nick Shulman2021-08-05
Using Skyline for target-directed DCC analysisantoine lacour2021-08-04antoine lacour2021-08-05
Max Heightminyg982021-07-15Nick Shulman2021-08-04
Specifying Integration Boundariesjrenders2020-11-09wlstutts2021-08-04
Lipid Creator No longer Exporting to Skylinewlstutts2021-06-24wlstutts2021-08-04
Feature Request: Background Colorsjdevitt2021-04-07lpino2021-08-03
Orbitrap DIA search using converted Spectronaut libraryzhangfangfei2021-08-02Nick Shulman2021-08-02
MS stats error exporting the reportio2021-07-28io2021-08-02
Selection of razor peptides for Quantitative proteomicsjyoti 165412021-07-30jyoti 165412021-07-30
Number of scans from raw dataulisse cucchi2021-07-29ulisse cucchi2021-07-30
Agilent QQQ 6460 Data import showing " chromatogram information unavaliable"xue shi2021-07-29Nick Shulman2021-07-29
Seperate MS/MS Filtering Settings for Light vs. Heavy Precursorsn t wamsley2021-07-19n t wamsley2021-07-29
More proteins shown than library in SWATH analysisheyang2021-06-16Kaipo2021-07-28
CE optimization on a Sciex Qtrapalejandro.cohen2021-07-15Brendan MacLean2021-07-28
Skyline-daily (64-bit) 21.0.9.139 (6dbba07d9) cannot load the library.tsv file from EasyPQPfcyu2021-06-02Kaipo2021-07-28
Comparing Peak Scoring / Sample Specific Peak Scoring Modelspeter r mosen2021-06-17Brendan MacLean2021-07-28
MSstats installation errorio2021-07-26Nick Shulman2021-07-27
Sciex 7500 Supportdawn dufield2021-07-26Brian Pratt2021-07-27
FAIMS supportsudip ghosh209752021-07-26Brian Pratt2021-07-27
Using same molecules as iRT standard and surrogate internal standards?Will Thompson2021-07-02Nick Shulman2021-07-26
Building a spectral library using msplaura corveleyn2021-02-02Brendan MacLean2021-07-26
Error to install skyline dailyAline2021-07-23Nick Shulman2021-07-26
Importing peak boundaries via SkylineRunnerl render2021-07-19Brendan MacLean2021-07-25
Different types of skyline filesheyang2020-02-27Brendan MacLean2021-07-23
ambiguous PRM peptides don't show up as targets, but can be found in the librarysusanne matschi2021-07-23Nick Shulman2021-07-23
dotp value after Prosit integration in Skylinemeharunnissakohli2021-07-22Nick Shulman2021-07-22
Error when opening saved Skyline filesantoine lacour2021-07-22Nick Shulman2021-07-22
Boxcar supportDiegoB2020-05-13Jacob2021-07-21
Skyline install problemgemma hardmanfowler2021-07-14Nick Shulman2021-07-21
saving all transition image files at once and adjusting based on y-axis for selected peakjiwon hong2021-07-20Brendan MacLean2021-07-21
DIA Umpire errorFrancis Beaudry2021-07-20Nick Shulman2021-07-20
How does Skyline treat shared fragment ions between precursors of same peptide from MSE data?Juan C. Rojas E.2021-07-07Juan C. Rojas E.2021-07-20
Exporting all peaks and mass accuracy for chromatogramsthomas hopf2017-07-24l render2021-07-19
export fasta of all verified proteins from Skylinekguehrs2021-07-15kguehrs2021-07-18
Peak boundariesminyg982021-07-17Nick Shulman2021-07-17
Filtering a Skyline document for protein lengthcabarnescabarnes2021-07-12cabarnescabarnes2021-07-16
MS/MS ion rank and type for full scan dataroman sakson2021-07-12roman sakson2021-07-15
Problem importing Brucker Tims-TOF Pro data in docker containerm j noga2021-04-23Brian Pratt2021-07-14
Duplicate transitionshober2021-02-22hober2021-07-13
Library Building FailureTomson2021-06-29Tomson2021-07-13
Can I run without .NET 3.5?DWheatcraft2021-02-11Brian Pratt2021-07-12
humble plea for peak boundary featureWill Thompson2021-06-21roman sakson2021-07-12
SearchLinwei Li2021-06-07matt.chambers42@gmail.com2021-07-09
Determine sequence coverage for proteinssimon jaag2021-03-23Victor2021-07-09
Prosit mirrorGerhard Saalbach2021-07-06Gerhard Saalbach2021-07-07
Crash when importing Raw fileberjan been 247272021-07-01berjan been 247272021-07-05
How to open a spectra in skyline?qwa2272021-04-23Nick Shulman2021-07-03
how to export modified site?yetb02202021-07-01Juan C. Rojas E.2021-07-02
why some transitions are excluded in Transition Results reportminyg982021-06-30Nick Shulman2021-07-01
Structural and isotope-heavy modifications occurring on the same residuelpino2021-06-30lpino2021-07-01
Guidelines for reporting PRM data?saicharan ghantasala2021-06-30saicharan ghantasala2021-07-01
Question about library intensity for small molecule transition liststefanie2021-06-24stefanie2021-06-30
LoD higher than LoQ with small molecule analysisychiu22021-06-29Nick Shulman2021-06-29