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Failure opening File
alessandra tozzi1
2024-07-14 18:45
alessandra tozzi1
2024-07-15 17:37
Percolator error during EncyclopeDIA import of chromatogram library files (mzML)
michal zawadzki33223
2024-07-13 08:47
Nick Shulman
2024-07-15 09:24
Protein abundance
vmohanty
2024-07-12 08:26
Nick Shulman
2024-07-12 10:54
DDA with MS1 filtering
halim
2024-07-11 04:37
Nick Shulman
2024-07-11 11:25
how to perform unspecific enzyme digestion
hui-song pak
2021-05-28 03:24
robert35795
2024-07-11 02:51
MS/MS data analysis related question
PP
2024-07-10 08:57
Nick Shulman
2024-07-10 10:30
Partly failed import of MRM3 data
h l elfrink
2024-05-02 04:13
Matt Chambers
2024-07-09 08:30
Doubts about transition list
gabidap
2024-03-27 06:46
Brian Pratt
2024-07-08 09:25
Question about how Skyline is handling MS2 data
zrhopkins
2024-07-03 05:19
zrhopkins
2024-07-08 08:20
Skyline-daily
Reza Nemati
2015-01-23 12:29
Mike MacCoss
2024-07-05 17:47
Export Candidate Peaks
anirudhkashyap511
2024-07-05 13:36
Nick Shulman
2024-07-05 15:35
MS2 signal missing in SureQuant experiment
michele puglia
2024-07-03 07:55
michele puglia
2024-07-05 05:32
Synchronize zooming works for some, but not other samples.
pavel shliaha
2024-07-02 11:52
Nick Shulman
2024-07-04 22:14
skyline-daily
1097064656
2024-07-04 05:15
Nick Shulman
2024-07-04 07:42
Error during download of external tools in skyline daily
giocanil
2024-07-02 08:10
giocanil
2024-07-03 06:37
Synchronize zooming works for some, but not other samples.
pavel shliaha
2024-07-02 12:53
pavel shliaha
2024-07-02 12:53
Problem extracting pressure information in Panorama for SST
David P
2024-06-28 07:58
David P
2024-07-01 03:10
PD results does not work for spectral library
jueun c kim
2024-06-11 11:54
jueun c kim
2024-06-28 13:51
PCA labels?
alexander lawandi
2024-06-28 09:15
alexander lawandi
2024-06-28 09:15
Issues setting Modification site
cvadival
2024-06-27 11:41
cvadival
2024-06-28 08:29
Error in generating .mzid file
elvistc
2024-02-15 22:09
Nick Shulman
2024-06-27 18:39
Loading a raw file that didn't quite finish running
edoud
2024-06-26 12:47
Brian Pratt
2024-06-26 13:33
Semaglutide peptide seqeunce
PP
2024-06-25 15:48
PP
2024-06-26 11:33
Precurser Selection Small Molecules
matthew.r.russell@manchester.ac.uk
2024-06-12 02:01
matthew.r.russell@manchester.ac.uk
2024-06-26 08:15
Cannot visualize product ion.
lkittinun1
2024-06-25 20:49
kittinun l
2024-06-26 06:42
Trouble importing from Agilent ".D" files
dhass
2024-06-25 13:13
Nick Shulman
2024-06-25 13:46
Export hundreds of MS1 chromatrograms
nesgio
2024-06-11 05:50
nesgio
2024-06-24 01:04
Error importing TimsTOF data in mzXML format, exported from PEAKS
julian matytchak
2024-06-11 02:29
Juan C. Rojas E.
2024-06-21 01:16
Prosit error in EncyclopeDIA search in skyline
n prust
2024-06-20 23:18
Nick Shulman
2024-06-21 00:48
Importing MyriMatch search results into Skyline after parsing them through PeptideProphet
staab-weijnitz
2024-03-16 09:33
Nick Shulman
2024-06-20 12:39
How to export chromatograms with SkylineRunner.exe without raw files
joon-yong lee
2024-06-19 15:20
joon-yong lee
2024-06-20 10:18
Raw files storage path changes or raw data archivial storage
ailaria
2018-09-07 09:02
joshuasmith
2024-06-20 07:24
Refining CE optimizations with smaller step size
rschoenh@fhcrc.org
2024-06-17 04:44
Nick Shulman
2024-06-19 07:58
.pdResult File Import Issue
wes rogers
2024-06-14 14:12
wes rogers
2024-06-18 16:19
Skyline wouldn't import chromatrgram
jaenyeon
2024-06-18 08:25
jaenyeon
2024-06-18 11:44
Skyline software information
eo03nb
2024-06-14 04:35
eo03nb
2024-06-18 04:43
Export dot p of library spectrum vs midas data
heyang
2024-05-30 10:40
Nick Shulman
2024-06-14 11:38
About some transitions not being detected
riri riri h 25
2024-06-09 21:49
riri riri h 25
2024-06-14 00:24
Bibliospec version 3 does not support my DIA-NN library file
bora onat
2024-06-12 11:00
Nick Shulman
2024-06-13 10:48
Missing peak area measurement bars in Skyline Replicate plots when optimizing CEs on a 6500 Qtrap
rschoenh@fhcrc.org
2024-06-13 04:54
Nick Shulman
2024-06-13 08:37
Modifications on N and P with 13C and 15N in Peptide VINKQTPNRQIW
teerapat rojsajjakul35372
2024-06-13 07:34
Nick Shulman
2024-06-13 07:46
How to add acetylation modification to the K-terminal in Skyline document?
caixue
2024-06-13 01:11
Nick Shulman
2024-06-13 05:02
Request: Consistency between note importing and exporting
Chris Ashwood
2024-06-06 23:14
Chris Ashwood
2024-06-12 19:15
Modifications show same masses when rounded
hassan hijazi
2024-06-12 08:29
hassan hijazi
2024-06-12 09:55
"chromatogram information unavailable"
luzalonsodasques
2024-06-10 08:31
Nick Shulman
2024-06-10 09:50
Error code 203-CPUA
chelec everest
2024-06-10 04:08
Nick Shulman
2024-06-10 07:27
Unable to build PEPTIDE spectral library using .pep.xml and .mzxml files downloded together from PEAKS 11
ciaranmc 28
2024-06-05 11:51
Nick Shulman
2024-06-07 16:21
error importing SPEC-lib file ( Import DIA Peptide search)
floor leurs
2024-06-06 00:39
Nick Shulman
2024-06-06 12:45
detection of too long peptide (34 residues)
wangrui2011pku
2024-06-03 18:34
wangrui2011pku
2024-06-05 21:39
Small molecules - Individual regression weighting for each analytes?
johannes kutzler
2023-10-14 10:54
david fuentes
2024-06-05 07:16
Skyline is missing some MRM chromatograms and spectra in my Sciex MIDAS files
vonroep
2024-06-04 09:30
vonroep
2024-06-05 01:50
Deep MRM Server Error
gdrumm
2024-06-04 05:09
gdrumm
2024-06-04 05:09
Feature finding feedback for Daily
Chris Ashwood
2024-05-17 20:27
Chris Ashwood
2024-05-31 13:20
Failed importing results file .wiff: Sequence contains no elements
george wang cal
2024-05-31 08:06
george wang cal
2024-05-31 13:05
Skyline crashes when trying to add peptide modifications
areiter30500
2024-05-30 20:03
Nick Shulman
2024-05-30 20:36
Exporting no retention time to transition list
Jeff Whiteaker
2024-01-05 10:57
Nick Shulman
2024-05-29 20:06
Overintegration problem
luzalonsodasques
2024-05-27 07:50
Mike MacCoss
2024-05-29 09:50
Building libraries with Koina causes error
msylvest
2024-05-21 05:32
Matt Chambers
2024-05-24 10:22
Disulfide Bond as modification
thcsam
2024-05-21 06:51
thcsam
2024-05-21 20:11
Koina dotp refinement filter
rj8@uw.edu
2024-05-21 14:51
rj8@uw.edu
2024-05-21 14:51
Nothing (nether chromatography peaks nor statistic graphs )showed up after transition list and results were imported.
q zhang
2024-05-21 02:22
Nick Shulman
2024-05-21 08:52
Calibration curve
mdsir
2024-05-19 18:26
Nick Shulman
2024-05-19 22:01
Bruker API does not support Unicode in filepaths
j-kindermans
2024-05-17 02:07
j-kindermans
2024-05-17 02:07
disulfide crosslinked homodimeric also covalently modified peptide does not appear to work
warham
2024-05-14 08:08
Nick Shulman
2024-05-14 18:45
Area Under the curve
naimamuntu
2024-05-14 04:33
Nick Shulman
2024-05-14 07:30
Error importing DIA-NN search results with newest Skyline-daily update
Shawn Rice
2024-05-13 06:40
Matt Chambers
2024-05-13 10:39
"No chromatogram available"
nbekhti
2024-05-10 06:09
nbekhti
2024-05-10 07:51
Inquiries about MRM Data export
mdsir
2024-05-08 18:10
Nick Shulman
2024-05-08 18:14
In few data files peak peaking is not working
darshak niper
2024-05-08 12:42
Nick Shulman
2024-05-08 15:38
In few data files peak peaking is not working
darshak niper
2024-05-08 12:40
darshak niper
2024-05-08 12:40
Add compound ID in addition to the Molecule Name to Skyline
nbekhti
2024-05-05 12:40
Nick Shulman
2024-05-05 19:43
Prosit server unavailable
michal zawadzki33223
2024-04-11 04:22
michal zawadzki33223
2024-05-03 01:06
a small molecule charge state notation question
warham
2024-05-01 14:39
Brian Pratt
2024-05-01 21:18
M+X peaks for fragment ions
sasha
2013-05-22 09:16
Nick Shulman
2024-05-01 16:04
Import speclib from DIANN with customized non-unimod modifications
gianin thomann
2024-04-23 04:20
Matt Chambers
2024-05-01 10:18
Exporting images with publication quality
antrixj
2024-04-25 15:29
antrixj
2024-04-30 09:11
Annotate unknow full scan compound using NIST GC-MS library
wanying cao
2024-04-26 09:06
wanying cao
2024-04-29 06:34
How to bulid the BiblioSpec library
2378572477
2024-04-28 23:47
2378572477
2024-04-28 23:47
Adding Precursor [M-1] trace to all precursors by default
sean jensen
2024-04-25 21:39
sean jensen
2024-04-28 16:12
Import of search results from Peptideatlas to build the BiblioSpec library
2378572477
2024-04-28 00:52
Nick Shulman
2024-04-28 10:24
"Not Responding" after MS1 filtering
y nishimura
2024-04-25 04:39
Nick Shulman
2024-04-26 07:59
The tutorials in the official website and the tutorials in the software should be consistent, it's too messy now!
839868794
2024-04-06 02:44
Brian Pratt
2024-04-25 12:08
How to specify simultanous structural modification for N-term and for a side chain, if the modified sidechain is on the N-terminal amino acid
pavel shliaha
2024-04-24 14:31
Nick Shulman
2024-04-24 14:38
Quantification with a surrogate analyte
dsgk
2024-04-24 03:55
Nick Shulman
2024-04-24 10:30
Preparation of spectral libraries with the Astral Analyser
n dasilva
2024-04-24 01:55
Mike MacCoss
2024-04-24 10:09
Problems with Exporting Peak Intensities
matser
2024-04-19 22:16
Nick Shulman
2024-04-22 12:44
Loading transition list not working
ylee
2024-04-22 12:18
Nick Shulman
2024-04-22 12:40
regarding MSstatsashiny
bandgara22
2024-04-22 10:09
Nick Shulman
2024-04-22 12:04
How to create a library from the refined transitions in skyline?
pavel shliaha
2024-04-20 14:51
Nick Shulman
2024-04-20 14:54
Import of search results from ProteomeDiscoverer to build the spectral library
yanyan qu30905
2024-04-19 09:03
yanyan qu30905
2024-04-19 09:19
Multiple Skyline report templates combined into single Excel Workbook?
josiah.hutton
2024-04-17 11:28
josiah.hutton
2024-04-18 14:55
MSstats some R packages failed to download
bandgara22
2024-04-17 00:59
Nick Shulman
2024-04-18 12:01
Report problems
jean-christophe prost
2024-04-17 08:41
jean-christophe prost
2024-04-18 06:02
Transitions not selected even with
jiwon hong
2024-04-18 01:23
jiwon hong
2024-04-18 01:23
Importing raw files from Orbitrap Astral with FAIMS
edf4n
2024-04-17 12:54
edf4n
2024-04-17 17:27
How to make the integration easy and fast?
nbekhti
2024-04-16 18:50
nbekhti
2024-04-17 12:50
Error Library Building from FragPipe (can't find mzml/mgf)
david schmidt
2024-04-16 04:41
Nick Shulman
2024-04-17 08:04
artificial modification
petra janning
2024-04-17 07:14
petra janning
2024-04-17 08:03
modifications are not set correctly
lode denolf
2024-04-17 07:47
lode denolf
2024-04-17 07:47
modifications are not set correctly
lode denolf
2024-04-17 06:27
Nick Shulman
2024-04-17 07:23