2026 UW Course

Frontiers in Proteomics: Advanced Skyline Applications

Dear Skyline Users,

The Skyline Team and our invited instructors are pleased to announce this all-new advanced course:

  • Who: Experienced Skyline users
  • When: July 6 - 10, 2026
  • Where: University of Washington, Seattle
  • Cost: Academic: $500 | Industry: $1250
  • Apply by: April 1, 2025
  • Participants: 30

Apply now »


The all-new curriculum is designed for experienced Skyline users to deepen their expertise across advanced quantitative proteomics topics. Through a mix of lectures, hands-on exercises, and guided discussions, participants will explore real-world real-world system suitability and QC, advanced Skyline features, AI-driven workflows, and experiment design tailored to your own research goals.
Key topics include:

  • System suitability and quality control strategies.
  • Statistical methods for designing and analyzing advanced DIA experiments.
  • The Skyline software ecosystem and integrating external tools effectively.
The Instructor List includes researchers and software developers from the MacCoss Lab, alongside experts with extensive experience in targeted and quantitative proteomics. This is a unique opportunity to work and learn directly from the creators of Skyline, and those pushing the field forward.

Applicants will be notified by April 10. Payment will secure your spot and includes course materials, refreshments, and a course dinner. Participants are responsible for their own travel, lodging and meals.

Registration includes course materials, refreshments, and a course dinner. Participants should organize their own travel, lodging and meals.

Don't miss this chance to explore the frontiers of proteomics and expand your skills using Skyline as a lens for discovery.

We hope you will join us.

Brendan MacLean, 
Skyline Project Lead 


Apply now »


When: July 6 - 10, 2026
Where: Foege Building, University of Washington, Seattle
    (Meet at 9AM Monday between Foege South and North)  (map)
Cost: Academic: $500 | Industry: $1250
Apply by: April 1, 2026
Participants: 30
Room & Board: Not included. 

Related Links:
Course Schedule
Instructor List