Issue 833: Show rdotp in Peak Areas > Replicate Comparison plot when Normalize To > Heavy is chosen

issues
Status:closed
Assigned To:Guest
Type:Todo
Area:Skyline
Priority:3
Milestone:21.2
Opened:2021-08-11 by Brendan MacLean
Changed:2022-02-23 by Brendan MacLean
Resolved:2021-11-29 by Rita Chupalov
Resolution:Fixed
Closed:2022-02-23 by Brendan MacLean
2021-08-11 Brendan MacLean
Title»Show rdotp in Peak Areas > Replicate Comparison plot when Normalize To > Heavy is chosen
Assigned To»ritach
Type»Todo
Area»Skyline
Priority»3
Milestone»21.2
It has been requested a couple of times on the support board that we provide a way to show rdotp in the Peak Areas > Replicate Comparison plot:

https://skyline.ms/announcements/home/support/thread.view?rowId=36683

The most reasonable place to show this would be when the user chooses right-click > Normalize To > Heavy (or any other standard type). This gives us a clear definition for what the rdotp refers to (the normalization ratio) and it would show up only when the peptide is selected and the number of bars usually gets reduced to just one per replicate. Though, there are some more extreme cases when multiple standard types are defined.

You can use TestExistingExperimentsTutorial for example data, and also the CPTAC data on Panorama Public:

https://panoramaweb.org/Panorama%20Public/2015/Schilling%20-%20main_Study_9/project-begin.view

2021-11-29 Rita Chupalov
resolve as Fixed
Statusopen»resolved
Assigned Toritach»Brendan MacLean
This is implemented and will be available in 21.2. PR: https://github.com/ProteoWizard/pwiz/pull/1743

2021-11-29 Rita Chupalov
Assigned ToBrendan MacLean»ritach

2022-02-23 Brendan MacLean
close
Statusresolved»closed
Assigned Toritach»Guest