If the MS/MS Acquisition Method specified at "Settings > Transition Settings > Full Scan" is "DIA" and you have an isolation scheme which lists the windows (that is, the isolation scheme does not say "Use results data isolation targets") then the "Precursor m/z exclusion window" text box gets replaced by a checkbox "Use DIA precursor window for exclusion".
My understanding is that there are some mass spectrometers which cannot detect fragment ions whose m/z is inside of the window that is being fragmented.
That is, any product ion whose m/z falls within that window will continue to get fragmented until its m/z is no longer in that window.
There is a bit of a discussion about how that works and why there needed to be two different settings here:
https://skyline.ms/issues/home/issues/details.view?issueId=333
-- Nick