Comparing MS1 data with and without FAIMS | paul.derbyshire | 2024-02-15 04:07 | |||||||||||||||
Hi Skyline team, I've been running some samples on two different Thermo mass specs - Orbitrap Fusion and Orbitrap Eclipse with FAIMS. When I build the data in Skyline I see distinct saw-tooth chromatograms from Eclipse/FAIMS samples but not from Fusion samples (see attached screenshots). Applying smoothing masks the saw-tooth appearance. Is this a effect of the FAIMS ion separation or is there something in transition settings that needs to be applied before data import? Thanks in advance. Paul Derbyshire |
|||||||||||||||||
| |||||||||||||||||