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Skyline-daily
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Error
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OK More Info
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System.IO.IOException: Error occurred running process.
[03:03:40] Missing .DIA file:
[03:03:40] Encountered Fatal Error!
[03:03:40] edu.washington.gs.maccoss.encyclopedia.utils.EncyclopediaException: Can't read file C:\Users\jste0061\AppData\Local\Apps\2.0\A27R8HNY.TN2\HJZCM6HZ.ERX\skyl..tion_2e441fc3bf6adc7f_0017.0000_f621a40fd78fad56
    at edu.washington.gs.maccoss.encyclopedia.filereaders.StripeFileGenerator.innerGetFile(StripeFileGenerator.java:69)
    at edu.washington.gs.maccoss.encyclopedia.filereaders.StripeFileGenerator.getFile(StripeFileGenerator.java:40)
    at edu.washington.gs.maccoss.encyclopedia.filereaders.StripeFileGenerator.getFile(StripeFileGenerator.java:27)
    at edu.washington.gs.maccoss.encyclopedia.datastructures.AbstractSearchJobData.getDiaFileReader(AbstractSearchJobData.java:34)
    at edu.washington.gs.maccoss.encyclopedia.datastructures.QuantitativeSearchJobData.getDiaFileReader(QuantitativeSearchJobData.java:25)
    at edu.washington.gs.maccoss.encyclopedia.SearchToBLIB.getProcessedJobs(SearchToBLIB.java:625)
    at edu.washington.gs.maccoss.encyclopedia.SearchToBLIB.convert(SearchToBLIB.java:495)
    at edu.washington.gs.maccoss.encyclopedia.SearchToBLIB.convertEncyclopedia(SearchToBLIB.java:362)
    at edu.washington.gs.maccoss.encyclopedia.SearchToBLIB.main(SearchToBLIB.java:133)
    at edu.washington.gs.maccoss.encyclopedia.Encyclopedia.main(Encyclopedia.java:91)

Command-line: C:\Users\jste0061\AppData\Local\Apps\2.0\A27R8HNY.TN2\HJZCM6HZ.ERX\skyl..tion_2e441fc3bf6adc7f_0017.0000_f621a40fd78fad56\Tools\openlogic-openjdk-jre-8u342-b07-windows-64\bin\java.exe -Xmx12288M -jar "C:\Users\jste0061\AppData\Local\Apps\2.0\A27R8HNY.TN2\HJZCM6HZ.ERX\skyl..tion_2e441fc3bf6adc7f_0017.0000_f621a40fd78fad56\Tools\encyclopedia-2.12.30-executable.jar" -Duser.language=en-US -Duser.region=US -Djava.io.tmpdir=C:\Windows\Temp -v2scoring "True" -i "" -libexport -o "C:\Data_Analyses\RS Human SwissProt Jun2020-z3_nce33.elib" -f "C:\Data_Analyses\RS Human SwissProt Jun2020.fasta" -l "C:\Data_Analyses\RS Human SwissProt Jun2020-z3_nce33-prosit.dlib"
Working directory:
   at pwiz.Common.SystemUtil.ProcessRunner.Run(ProcessStartInfo psi, String stdin, IProgressMonitor progress, IProgressStatus& status, TextWriter writer, ProcessPriorityClass priorityClass, Boolean forceTempfilesCleanup, Func`3 outputAndExitCodeAreGoodFunc, Boolean updateProgressPercentage) in C:\proj\skyline_23_1\pwiz_tools\Shared\Common\SystemUtil\ProcessRunner.cs:line 180
   at pwiz.Skyline.Model.Lib.EncyclopeDiaHelpers.GenerateLibrary(String encyclopeDiaLibInputFilepath, String encyclopeDiaElibOutputFilepath, String fastaFilepath, IEnumerable`1 diaDataFiles, IProgressMonitor progressMonitor, IProgressStatus& status, EncyclopeDiaConfig config, Boolean quantLibrary) in C:\proj\skyline_23_1\pwiz_tools\Skyline\Model\Lib\EncyclopeDiaHelpers.cs:line 629
   at pwiz.Skyline.FileUI.PeptideSearch.EncyclopeDiaSearchControl.Search(EncyclopeDiaSettings settings, CancellationTokenSource token, IProgressStatus status) in C:\proj\skyline_23_1\pwiz_tools\Skyline\FileUI\PeptideSearch\EncyclopeDiaSearchDlg.cs:line 633
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