Title | | » | Add a SkylineRunner command-line parameter to import QC data from a directory |
Assigned To | | » | Brendan MacLean |
Type | | » | Todo |
Area | | » | Skyline |
Priority | | » | 2 |
Milestone | | » | 1.2 |
It looks like Thermo instruments only allow a single global command to be executed before or after each acquisition.
To simplify setting up SkylineRunner to automatically import QC data into a document as it is collected, we need to add two new parameters to the command-line interface:
--import-all=path/to/folder
Imports from a folder all files or sub-folders which are not already in the document, naming each with the basename of the file or sub-folder, unless the --import-naming-pattern parameter is also supplied.
--import-naming-pattern=reg-ex
A regular expression from which the first group will be used to name replicates in an --import-all operation (e.g. [^_]_(.*) for everything after the first underscore.