Issue 1025: Feature finding should provide information in terms of the expected peptides in a document - what's novel in the search result, what's missing

issues
Status:open
Assigned To: Brian Pratt
Type: Defect
Area: Skyline
Priority: 3
Milestone: 4.3
Opened:2024-06-13 12:39 by Brian Pratt
Changed:2024-06-13 12:39 by Brian Pratt
Resolved:
Resolution:
Closed:
2024-06-13 12:39 Brian Pratt
Title»Feature finding should provide information in terms of the expected peptides in a document - what's novel in the search result, what's missing
Assigned To»Brian Pratt
Type»Defect
Area»Skyline
Priority»3
Per a zoom call with Yu at Regeneron 6/13/24:

For MAM it's interesting to know both:
 Which features were found that are NOT consistent with any expected targets
 Which expected targets are NOT consistent with any found features

Is this just a text report, or do we want to add some kind of attributes to the Skyline data model?

For their purposes, the fact that we currently only look for peptide-like features is fine. They think about unexpected modifications etc.