Maintaining Integration Windows When Re-importing Data

Maintaining Integration Windows When Re-importing Data meyermr  2014-02-28
Hi Skyline Team,

I'd like to know if Skyline can maintain integration windows manually set by the user when re-importing a data file? For example, when I manually set the integration window for a given peak, add additional fragment ions to the peptide tree, and then re-import the data...Skyline will shift the integration windows slightly. Is there a way to override this so I don't have to manually go through and reset the integration windows?

Thanks for the help,
Brendan MacLean responded:  2014-02-28
Hi Matt,
If you can give me a small example case, I will look into this. If you are using Edit > Manage Results > Re-import, then this should not be happening.

A good example would help me debug why it is in your case.

I will contact you through email with a location you can use to post files.

Thanks for taking the time to report this, and sorry it is not working correctly for you yet.

bzhai2 responded:  2020-02-18
Manual Integration Windows was not maintain when I re-import the raw data.