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PRM conductor Importing error "Index was outside the bounds of the array"

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PRM conductor Importing error "Index was outside the bounds of the array" 704743362  2025-03-15 06:13
 

Hi,I have 2000 proteins that I want to verify using Skyline, but integration is a big problem. I can ensure that the retention time is 0.5 minutes earlier than the ID. Therefore, I want to narrow the integration range through peak boundaries. However, when using PRM Conductor for screening, I encountered an error message saying "Index was outside the bounds of the array". Could you help me solve this problem?
 
 
Nick Shulman responded:  2025-03-15 10:31
Can you give us more information about the error that you are encountering?

If you could post the entire text of the error message including the programming call stack where it occurred that would give us more information about where the bug is and whether the mistake is in Skyline or in the PRM Conductor external tool.

For bugs in external tools, we recommend posting your question in the support board of the individual tool because then your message will be received by the tool authors.
The support board for PRM conductor is here:
https://skyline.ms/project/home/software/Skyline/tools/Support/PRM%20Conductor/begin.view

With bugs like this it is often helpful if you can send them your Skyline document.
In Skyline you can use the menu item:
File > Share
to create a .zip file containing your Skyline document and supporting files including extracted chromatograms.
Files which are less than 50MB can be attached to these support requests.
You can always upload larger files here:
https://skyline.ms/files.url
-- Nick