Problem exporting data files with the new skyline version 23.1

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Problem exporting data files with the new skyline version 23.1 f bernuzzi  2023-09-27 08:47
 

Dear Skyline team,

I hope you are well. I am new to skyline so apologise if I may have missed something, but last week I did some analysis and exported the files without having any issues. This was using the old skyline. The other day I received an email that a new was released so I downloaded the newest version. Just now I finished analysing some samples as was planning on to export them but the software doesn't allow me to. I don't know whether with the new version something may have changed
The way I have been instructed to export the samples is through the following:
File > export > report. In the report then I would then select edit list, select samples in columns which would prompt me import a file. I would insert the samples columns, press import and when I first did the samples in columns became highlighted. This time however, it fails to recognise the file.
Any suggestion on how to deal with the issue and export the files. Worst case scenario I was thinking of uninstalling and reinstalling but don't know whether that may help. I have also attached several pictures, hopefully that will be more clear.
Many thanks for your help and support
Best wishes

Federico Bernuzzi, PhD
Cancer Research Scotland

 
 
Nick Shulman responded:  2023-09-27 09:45
You should use the menu item:
View > User Interface > Mixed
to switch from Small Molecules mode into "Mixed" mode.

Skyline 23.1 now hides proteomics reports when you are in small molecule mode and vice versa.
Sorry for the confusion that now results in reports being hidden which did not used to be.
--Nick
 
f bernuzzi responded:  2023-09-28 01:08
Hi Nick,

Thank you so much for the prompt reply. I am in Edinburgh today for work. I will give it a go tomorrow when I am back in the office
It sounds like a quick fix so hopefully there will be no issues.
Thanks again

Best wishes

Fred