Can you send us the files "230727_Inf10_Trypsin.wiff" and "230727_Inf10_Trypsin.wiff.scan"?
If those files are less than 50MB you can attach them to this support request.
You can upload larger files here:
One thing I noticed is that at "Settings > Transition Settings > Full Scan", you have "Retention time filtering" set to "Use only scans within 5 minutes of MS/MS IDs".
With PRM data, you would normally want that set to "Include all matching scans" because you have already told the mass spectrometer what time range to collect data for each precursor.
The "Retention time filtering" setting is definitely not the cause of your problems (if it were, you would probably see chromatograms that were 10 minutes long).
After I see your .wiff and .wiff.scan files I will probably be able to tell you why Skyline is doing what it is doing.