Adding to my transition list (small molecules) does not show the new molecules

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Adding to my transition list (small molecules) does not show the new molecules mazzouny  2020-01-06
 

I hope these questions are not redundant. Whenever I add to my transition list, everything I add, is not getting analyzed. I need to re-insert a new list and import the RAW files from scratch in order to quantify a new compound in my small molecules list. Are there any re-analyze option ?
Also, when I export the transition list, it shows that there is no CE chosen (because I'm doing MS1 quant) and it export it as a generic format. When I import the same file again, I get an error. Any idea?
I'm using version 19.10.193, small molecules installation.
Thanks

 
 
Nick Shulman responded:  2020-01-06
Whenever you add new transitions to your document you need to reimport your results in order to see chromatograms for the new things.
You can do that by going to:
Edit > Manage Results > Reimport

I do not understand your question about exporting a transition list and then getting an error when you try to import it again.
I might understand your question if I could see your Skyline document.

In Skyline, you can use the menu item:
File > Share
to create a .zip file containing your Skyline document and supporting files including extracted chromatograms.

If that .zip file is less than 50MB you can attach it to this support request.
Otherwise you can upload it here:
https://skyline.ms/files.url

-- Nick