I guess so. Yes, it turns out I can add "Explicit Retention Time" and "Explicit Retention Time Window" to the transition list.
I would love to import the peptides as peptides, but then I have to create an entire spectral library right? Is there a better way to import a peptide list from a csv or similar? I know I can import a custom spectral library in xml, but I can't seem to find a simple way to create a custom spectral library. Any suggestions?
Thanks,
Devin