|Command line interface for peptide search||dsullivan||2019-07-31|
Thanks for developing skyline. I am trying to use it to perform some automated analysis for our lab. We have a small set of known peptides and modifications that we want to import and run in skyline.
I have been generating all combinations on my own in python and importing the respective m/z's to skyline as a transition list, however I see that in the recent release there is more support for peptides and the command line (and now included command line documentation). Great!
My questions are:
I'm very new to skyline so I apologize if there is an easy resource I have not been able to find.