Dear Skyline Team,
I have been exporting skyline chromatograms to perform some diagnostics with scan header information.
For export of the chromatograms I use the Report Objects:
Proteins/Peptides/Precursors/Transitions/Transition Results/Chromatogram/Raw Data/...
.../Raw Times
.../Raw Intensities
When automating this with a lot of files etc, it turns out that matching diagnostic data via scan retention times can get quite messy due to loss of precision on export.
You also store a Vector of ScanIndexes
with Chromatograms. Could you maybe add an option to export those?
Best regards,
Jonas