|Chromatograms not imported / visualized for small molecules||fredrik edfors||2018-12-08|
Thanks for the awesome software. I usually work with proteomics but got interested in the small molecules tab and I'm exploring some of our metabolomics datasets using Skyline. I'm getting an inconsistent import of chromatograms, and it seems like skyline has imported everything but cannot visualize a random subset of the identified peaks. It will return an area but says that the Chromatogram is unavailable).
Please see the minimal dataset enclosed. I can see 9-Decenoylcarnitine for example, but not a single tracer from Lactic for instance (even thus I get a bar in the peak are graph). It seems like this error also occurs in the middle of a run for a set of my tracers when working with an extensive list of compounds (500+) but could be solved by dividing the set of molecules into a smaller amount. This set is however only covering 21 precursors so I don't know how to explain it.
Cheers, and grateful for any help.