|SMILES peptide sequence entry into skyline||faizanzubair2||2018-11-14|
Dear Skyline Team,
Thank you for the amazing piece of software that has made a tremendous influence in biomarker research!
I am trying to develop automated MRM methods using skyline for heavily modified peptides (containing methylation, lipid chains, non-natural amino acids). Due to number of these peptides, entering them and modifying them individually in Skyline is very tedious. I have list of sequences in SMILES format-- can those be inputted directly into Skyline? Alternatively, is there a converter that converts SMILES format into skyline compatible sequences?
Thank you so much!