I can import QQQ data acquired with one of our 6490 instrument that is using Masshunter version B.06.00.
However, I can not import QQQ data acquired with another 6490 instrument that happens to have the MassHunter
version B.08.00. The data are in both cases located on the local harddrive. I am using the same Skyline document
and the same acquisition method. I obtain the error message when trying to load data generated from the
B.08.00 instrument. Any ideas to why I obtain the error message below?
Best,
Tasso
At 15:46:
Failed importing results file 'C:\Users\farmtm\Desktop\DATA_Skyline\Plate1_1_38+3HVs_RIA6490\181103_tmi_QC-A_Repl_1.d'.
[MassHunterDataImpl::ctor()] File not found: C:\Users\farmtm\Desktop\DATA_Skyline\Plate1_1_38+3HVs_RIA6490\181103_tmi_QC-A_Repl_1.d\AcqData\MSScan.xsd
Inner exceptions:
Exception type: System.Exception
Error message: [MassHunterDataImpl::ctor()] File not found: C:\Users\farmtm\Desktop\DATA_Skyline\Plate1_1_38+3HVs_RIA6490\181103_tmi_QC-A_Repl_1.d\AcqData\MSScan.xsd
[MassHunterDataImpl::ctor()] File not found: C:\Users\farmtm\Desktop\DATA_Skyline\Plate1_1_38+3HVs_RIA6490\181103_tmi_QC-A_Repl_1.d\AcqData\MSScan.xsd
at pwiz.CLI.msdata.ReaderList.read(String filename, MSData result, Int32 runIndex, ReaderConfig config)
at pwiz.ProteowizardWrapper.MsDataFileImpl..ctor(String path, Int32 sampleIndex, LockMassParameters lockmassParameters, Boolean simAsSpectra, Boolean srmAsSpectra, Boolean acceptZeroLengthSpectra, Boolean requireVendorCentroidedMS1, Boolean requireVendorCentroidedMS2, Boolean ignoreZeroIntensityPoints, Int32 preferOnlyMsLevel) in C:\proj\skyline_4_2_x64\pwiz_tools\Shared\ProteowizardWrapper\MsDataFileImpl.cs:line 142
at pwiz.Skyline.Model.Results.MsDataFilePath.OpenMsDataFile(Boolean simAsSpectra, Int32 preferOnlyMsLevel) in C:\proj\skyline_4_2_x64\pwiz_tools\Skyline\Model\Results\MsDataFilePath.cs:line 272
at pwiz.Skyline.Model.Results.ChromCacheBuilder.BuildCache() in C:\proj\skyline_4_2_x64\pwiz_tools\Skyline\Model\Results\ChromCacheBuilder.cs:line 191