hi everyone, has anyone been able to create a library from ms-amanda run through PD 2.2?
When I try the msf files or pdresult files I get an error about there being no q-values (I use the default ms-amanda optimized elucidator for the q-value calculation .
If I export the mzid from PD 2.2 I get a weird error invalid cvParam
Any ideas?
Cheers
Brett