The first step would be to get us some example data with a Skyline document you wish you could load it into. You can do this by using File > Share - Complete on your document (to created a ZIP file) and then upload that and at least one raw data file to:
And let us know it is there. Then we will have a look and assess how hard it would be to get Skyline to achieve what you are looking for. If it is not super hard, then the answer to your question would be, yes, we plan on supporting such modes. If it is super hard, then we might still "plan on supporting such modes" but the plan would take longer to execute or have an indefinite time line.
But, help us have a look at what you would like to work. It might be easy to fix.
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