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Easier way to edit IM windows for prm pasef method generation

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Easier way to edit IM windows for prm pasef method generation af1234  2021-08-26 08:01
 

I am doing prm-pasef with heavy peptides but the integration in the IM dimension is off (similarly to https://skyline.ms/announcements/home/support/thread.view?rowId=48885) for method generation from dda-pasef.
Is there any plan to have it adjustable like peak boundaries? How can I manually edit the IM windows?

Thanks!
 
 
Brian Pratt responded:  2021-08-26 08:59

The answer depends on the source of the IM windows, which might be obtained from a transition list, or a spectral library, or an ion mobility library. How are you obtaining the initial values?

Thanks for using the Skyline support board!

Brian Pratt