BiodiversityPlugin Support 

Welcome to the BiodiversityPlugin support board. If you have a question about using BiodiversityPlugin, or if you encounter a problem, you can post your questions here.

Support is provided by the creators of the software, as time allows, though we hope others will share their experience as the user community grows.

In order to post to the forum, you'll need to sign up for an account. If you already have an account but have forgotten your password, you can reset your password using the "Forgot your password?" link on the Sign-in page.

When you post a question, please include the following information:

  • Your operating system, the version of the software you are using, and any other information that may help us to answer your question
  • A detailed description of your problem or question, including instructions for re-creating any problem that you are encountering

If you are including text output from a tool, please attach files to your message, rather than pasting in long text.


Messages 
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Bug Fix - Release 1.0.4
Lillian Ryadinskiy 2016-02-09
Fix applied to the version checks. Previously, the plugin would display a Skyline version error message, even though the Skyline version met the minimum requirements.
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Database update - v1.0.3
Michael Degan 2015-12-07
Database updated in v1.0.3 to account for change in location of NCBI's FASTA files which are used to dynamically create a FASTA file to import to Skyline for genes and proteins of interest.
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Feature Changes - v1.0.2
(6 responses) Michael Degan 2015-06-24
Updates new in v1.0.2
 - Completed spectral library for Homo Sapiens All Tissues
    + Previously, since this organism did not have a complete spectral library, the plugin would reach a fail state. This addition addresses and corrects this issue, allowing users to investigate proteins from all tissues explored in http://www.nature.com/nature/journal/v509/n7502/abs/nature13302.html. Note: due to the large amount of data associated with this organism, calculating pathway coverage and generating the pathway images takes a significant amount of time.
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