Day 1: Biological significance of targeted proteomics experiments |
Dr. Ruedi Eebersold | Keynote session
"Design and Biological Significance of Targeted Proteomic Experiments” with Dr. Ruedi Aebersold (ETH).  |
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Dr. Eduard Sabidó | Tutorial/practical demonstration
“Introduction to Targeted Proteomics Workflows” with Dr. Eduard Sabidó (CRG).
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 Brendan MacLean | Tutorial/practical demonstration
“Skyline: Software Suite for Targeted Proteomics” with Brendan MacLean (Univ. of Washington).
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Day 2: How to get optimal targeted proteomics assays? |
Dr. Cristina Chiva | Tutorial/practical demonstration
“Instrument and Method Parameter Optimization for Targeted Proteomics” with Dr. Cristina Chiva (CRG).
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Dr. Olga Schubert | Tutorial/Practical demonstration
“Scheduled Targeted Methods and iRT Standards” with Dr. Olga Schubert (ETH).
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| Day 3: Data interpretation and statistical analysis |
Prof. Olga Vitek | Keynote session
“Experimental Design and Statistics for Targeted Proteomics” with Prof. Olga Vitek (Northeastern University). |
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Meena Choi | Tutorial/Practical demonstrations
“Statistical Analysis with MSstats” with Meena Choi (Purdue University).
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Dr. Christina Ludwig | Tutorial/Practical demonstration
"Absolute Quantitation in Targeted Proteomics Studies" with Dr. Christina Ludwig (ETH).
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| Day 4: Turning targeted proteomics high-throughput I |
Dr. Ludovic Gillet | Keynote session
“Targeted Data Extraction of the MS/MS Spectra Generated by Data-Independent Acquisition: a new concept for consistent and accurate proteome analysis” with Dr. Ludovic Gillet (ETH). |
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Ariel Bensimon | Tutorial/Practical demonstration
“Monitoring Phosphorylations by Targeted Proteomics” with Ariel Bensimon (ETH).
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Dr. Ludovic Gillet | Tutorial/Practical demonstration
“Generation of Libraries for the Identification in Mass Specotmetry Data-Independent Datasets” with Dr. Ludovic Gillet (ETH).
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Dr. Olga Schubert | Keynote session
“The Quantitative Proteome of Mycobacterium Tuberculosis by Targeted Mass Spectrometry” with Dr. Olga Schubert (ETH).
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Day 5: Turning targeted proteomics high-throughput II |
Prof. Michael MacCoss | Keynote session
“Design and Biological Significance of Targeted Proteomics Experiments: PRM and MSX” with Prof. Michael MacCoss (Univ. of Washington).
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