Issue 9: Library spectrum graph should offer UI to choose manually specturm matches

issues
Status:open
Assigned To:Brendan MacLean
Type:Todo
Area:Skyline
Priority:3
Milestone: 
Opened:2011-07-07 by Brendan MacLean
Changed:2017-09-23 by Brendan MacLean
Resolved:
Resolution:
Closed:2017-08-31 by Brendan MacLean
2011-07-07 Brendan MacLean
Title»Library spectrum graph should offer UI to choose manually specturm matches
Assigned To»Brendan MacLean
Type»Todo
Area»Skyline
Priority»3
Milestone»1.2
Currently Skyline chooses a single spectrum for each peptide-charge combination from which to choose transitions and calculate dot products. This may be either a spectrum matching a light or heavy precursor for that charge state. If the library/libraries contain both the light and heavy spectrum, the light will be used. If multiple libraries are present the first library to contain the spectrum will be used.

It should be possible to view all potential matching spectra in the library graph UI, and override the default choice, since it may not be the best available spectrum. In the future we might also want to think more about how people choose the best available spectrum, and have Skyline use similar heuristics to make the best choice automatically more often.

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Eva added the combo box to view secondary spectrum matches a while ago. The button to change manually the choice of spectrum will have to wait until next release, because Eva has had to focus on other things, and we are closing down v0.7

2014-01-08 Brendan MacLean
Milestone1.2»

2017-08-31 Brendan MacLean
resolve as Won't Fix
Statusopen»resolved
Unlikely to make our priority list with so few requests after so many years.

2017-08-31 Brendan MacLean
close
Statusresolved»closed
Assigned ToBrendan MacLean»Guest

2017-09-23 Brendan MacLean
reopen
Statusclosed»open
Assigned ToGuest»Brendan MacLean
This has been requested again. Perhaps we should reconsider.