resolve as By Design
Agilent would need to fix this, if they are interested. Specifically, the Agilent installer responsible for adding the automation tool to the Skyline Tools menu by running SkylineRunner would need to do the same thing for Skyline-daily with SkylineDailyRunner (found on the Skyline-daily installation page). The two projects are separate allowing side-by-side installation without Skyline-daily (our development release) impacting Skyline. They intentionally do not share any state. So, Agilent would need to install to both, if that is what you want to see.
Hope this helps.