Issue 380: Add support for PRM and DIA-with-DDA workflows to Import Peptide Search wizard

issues
Status:closed
Assigned To:Guest
Type:Todo
Area:Skyline
Priority:2
Milestone:3.1
Opened:2014-12-12 by Brendan MacLean
Changed:2015-06-24 by Brendan MacLean
Resolved:2015-06-24 by Brendan MacLean
Resolution:Fixed
Closed:2015-06-24 by Brendan MacLean
2014-12-12 Brendan MacLean
Title»Add support for PRM and DIA-with-DDA workflows to Import Peptide Search wizard
Assigned To»kaipot@u.washington.edu
Type»Todo
Area»Skyline
Priority»2
Milestone»3.1
We should add radio buttons to the bottom of the Library Build page of the Import Peptide Search wizard to allow the choice of the following workflows:

1. DDA with MS1 filtering
2. PRM
3. DIA with DDA spectral library

Then, depending on the choice we would do different things in the pages that follow. We would also want to have an icon for each workflow on the Start page, and when coming from the Start page, we would not show the radio buttons.

For PRM, we would just need to enable the MS/MS filtering settings on the full-scan settings page of the wizard, with acquisition method specified as Targeted.

For DIA with DDA, we would need to also make it possible to specify the files for chromatogram extraction completely unrelated to the built spectral library.

2015-06-24 Brendan MacLean
resolve as Fixed
Statusopen»resolved
Assigned Tokaipot@u.washington.edu»Brendan MacLean
This has been implemented

2015-06-24 Brendan MacLean
close
Statusresolved»closed
Assigned ToBrendan MacLean»Guest