Issue 327: File | Import | TransitionList... always gives charge state 1 if there is a peptide mass column to the left of the actual m/z column

issues
Status:closed
Assigned To:Guest
Type:Defect
Area:Skyline
Priority:3
Milestone:19.2
Opened:2014-04-23 by Brian Pratt
Changed:2021-12-30 by Brian Pratt
Resolved:2021-11-03 by Brian Pratt
Resolution:Fixed
Related:429
Closed:2021-11-03 by Brian Pratt
Related Issues
2014-04-23 Brian Pratt
Title»File | Import | TransitionList... always gives charge state 1 if there is a peptide mass column to the left of the actual m/z column
Assigned To»bspratt
Type»Defect
Area»Skyline
Priority»3
Milestone»2.6
It naively stops at the first column of the first line whose value is a plausible m/z value - and the mass is plausible for z=1. We should keep looking for others that may yield a higher charge state.
Also note that even if we do this, if the first line happens to describe an actual z=1, we'll get the rest wrong. We should examine all lines.
 
 QC_HDMSE_02_UCA168_3495_082213_IA_final_fragment.csv

2014-08-28 Brendan MacLean
Milestone2.6»3.1

2015-08-19 Brian Pratt
Related»429
We should just work around this by enabling the column picker capability found on the small molecule version of this dialog (see issue 429). We can just skip the attempt at figuring out column order when the user has gone to the trouble to lay it out for us.

2017-06-08 Brendan MacLean
Milestone3.1»

2019-06-14 Brian Pratt
Milestone»19.2

2021-11-03 Brian Pratt
resolve as Fixed
Statusopen»resolved
With the new proteomic column picker UI this is no longer an issue

2021-11-03 Brian Pratt
close
Statusresolved»closed
Assigned ToBrian Pratt»Guest