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Skyline-daily
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Failure opening W:\data\jcrojasecheverri-JuanC\Process\JRE_24_004_HumanPlasma_GlycoProteomics\DB_and_code\SkylineTemplateNotebook\GlycoProteomics_template.sky.
The file contains an error on line 3089 at column 14.
Neutral losses must be less than or equal to 5000.
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OK More Info
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Skyline-daily (64-bit) 25.1.1.174 (b787f1263)

System.Reflection.TargetInvocationException: There is an error in XML document (3089, 14). ---> System.InvalidOperationException: There is an error in XML document (3089, 14). ---> System.Reflection.TargetInvocationException: Exception has been thrown by the target of an invocation. ---> System.Reflection.TargetInvocationException: Exception has been thrown by the target of an invocation. ---> System.Reflection.TargetInvocationException: Exception has been thrown by the target of an invocation. ---> System.Reflection.TargetInvocationException: Exception has been thrown by the target of an invocation. ---> System.Reflection.TargetInvocationException: Exception has been thrown by the target of an invocation. ---> System.IO.InvalidDataException: Neutral losses must be less than or equal to 5000.
   at pwiz.Skyline.Model.DocSettings.FragmentLoss.Validate() in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\Loss.cs:line 221
   at pwiz.Skyline.Model.DocSettings.FragmentLoss.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\Loss.cs:line 247
   at pwiz.Skyline.Model.DocSettings.FragmentLoss.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\Loss.cs:line 226
   --- End of inner exception stack trace ---
   at System.RuntimeMethodHandle.InvokeMethod(Object target, Object[] arguments, Signature sig, Boolean constructor)
   at System.Reflection.RuntimeMethodInfo.UnsafeInvokeInternal(Object obj, Object[] parameters, Object[] arguments)
   at System.Reflection.RuntimeMethodInfo.Invoke(Object obj, BindingFlags invokeAttr, Binder binder, Object[] parameters, CultureInfo culture)
   at System.RuntimeType.InvokeMember(String name, BindingFlags bindingFlags, Binder binder, Object target, Object[] providedArgs, ParameterModifier[] modifiers, CultureInfo culture, String[] namedParams)
   at pwiz.Skyline.Util.XmlElementHelper`1.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 1180
   at pwiz.Skyline.Util.XmlUtil.ReadElements[TItem](XmlReader reader, List`1 list, IXmlElementHelper`1[] helpers) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 859
   at pwiz.Skyline.Model.DocSettings.StaticMod.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\Modification.cs:line 850
   at pwiz.Skyline.Model.DocSettings.StaticMod.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\Modification.cs:line 794
   --- End of inner exception stack trace ---
   at System.RuntimeMethodHandle.InvokeMethod(Object target, Object[] arguments, Signature sig, Boolean constructor)
   at System.Reflection.RuntimeMethodInfo.UnsafeInvokeInternal(Object obj, Object[] parameters, Object[] arguments)
   at System.Reflection.RuntimeMethodInfo.Invoke(Object obj, BindingFlags invokeAttr, Binder binder, Object[] parameters, CultureInfo culture)
   at System.RuntimeType.InvokeMember(String name, BindingFlags bindingFlags, Binder binder, Object target, Object[] providedArgs, ParameterModifier[] modifiers, CultureInfo culture, String[] namedParams)
   at pwiz.Skyline.Util.XmlElementHelper`1.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 1180
   at pwiz.Skyline.Util.XmlUtil.ReadElements[TItem](XmlReader reader, List`1 list, IXmlElementHelper`1[] helpers) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 859
   at pwiz.Skyline.Util.XmlUtil.ReadElementList[TItem](XmlReader reader, Enum name, List`1 list, IXmlElementHelper`1[] helpers) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 844
   at pwiz.Skyline.Util.XmlUtil.ReadElementList[TItem](XmlReader reader, Enum name, List`1 list) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 830
   at pwiz.Skyline.Model.DocSettings.PeptideModifications.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\PeptideSettings.cs:line 1759
   at pwiz.Skyline.Model.DocSettings.PeptideModifications.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\PeptideSettings.cs:line 1706
   --- End of inner exception stack trace ---
   at System.RuntimeMethodHandle.InvokeMethod(Object target, Object[] arguments, Signature sig, Boolean constructor)
   at System.Reflection.RuntimeMethodInfo.UnsafeInvokeInternal(Object obj, Object[] parameters, Object[] arguments)
   at System.Reflection.RuntimeMethodInfo.Invoke(Object obj, BindingFlags invokeAttr, Binder binder, Object[] parameters, CultureInfo culture)
   at System.RuntimeType.InvokeMember(String name, BindingFlags bindingFlags, Binder binder, Object target, Object[] providedArgs, ParameterModifier[] modifiers, CultureInfo culture, String[] namedParams)
   at pwiz.Skyline.Util.XmlElementHelper`1.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 1180
   at pwiz.Skyline.Util.XmlUtil.DeserializeElement[TObj](XmlReader reader, Enum name) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 894
   at pwiz.Skyline.Model.DocSettings.PeptideSettings.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\PeptideSettings.cs:line 221
   at pwiz.Skyline.Model.DocSettings.PeptideSettings.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\PeptideSettings.cs:line 206
   --- End of inner exception stack trace ---
   at System.RuntimeMethodHandle.InvokeMethod(Object target, Object[] arguments, Signature sig, Boolean constructor)
   at System.Reflection.RuntimeMethodInfo.UnsafeInvokeInternal(Object obj, Object[] parameters, Object[] arguments)
   at System.Reflection.RuntimeMethodInfo.Invoke(Object obj, BindingFlags invokeAttr, Binder binder, Object[] parameters, CultureInfo culture)
   at System.RuntimeType.InvokeMember(String name, BindingFlags bindingFlags, Binder binder, Object target, Object[] providedArgs, ParameterModifier[] modifiers, CultureInfo culture, String[] namedParams)
   at pwiz.Skyline.Util.XmlElementHelper`1.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 1180
   at pwiz.Skyline.Util.XmlUtil.DeserializeElement[TObj](XmlReader reader, Enum name) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 894
   at pwiz.Skyline.Model.DocSettings.SrmSettings.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\SrmSettings.cs:line 2212
   at pwiz.Skyline.Model.DocSettings.SrmSettings.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\DocSettings\SrmSettings.cs:line 2205
   --- End of inner exception stack trace ---
   at System.RuntimeMethodHandle.InvokeMethod(Object target, Object[] arguments, Signature sig, Boolean constructor)
   at System.Reflection.RuntimeMethodInfo.UnsafeInvokeInternal(Object obj, Object[] parameters, Object[] arguments)
   at System.Reflection.RuntimeMethodInfo.Invoke(Object obj, BindingFlags invokeAttr, Binder binder, Object[] parameters, CultureInfo culture)
   at System.RuntimeType.InvokeMember(String name, BindingFlags bindingFlags, Binder binder, Object target, Object[] providedArgs, ParameterModifier[] modifiers, CultureInfo culture, String[] namedParams)
   at pwiz.Skyline.Util.XmlElementHelper`1.Deserialize(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 1180
   at pwiz.Skyline.Util.XmlUtil.DeserializeElement[TObj](XmlReader reader, Enum name) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Xml.cs:line 894
   at pwiz.Skyline.Model.Serialization.DocumentReader.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\Serialization\DocumentReader.cs:line 613
   at pwiz.Skyline.Model.SrmDocument.ReadXml(XmlReader reader) in C:\proj\pwiz\pwiz_tools\Skyline\Model\SrmDocument.cs:line 2161
   at System.Xml.Serialization.XmlSerializationReader.ReadSerializable(IXmlSerializable serializable, Boolean wrappedAny)
   at Microsoft.Xml.Serialization.GeneratedAssembly.XmlSerializationReaderSrmDocument.Read1_srm_settings()
   --- End of inner exception stack trace ---
   at System.Xml.Serialization.XmlSerializer.Deserialize(XmlReader xmlReader, String encodingStyle, XmlDeserializationEvents events)
   at pwiz.Skyline.SkylineWindow.<>c__DisplayClass772_0.<OpenFile>b__0(IProgressMonitor progressMonitor) in C:\proj\pwiz\pwiz_tools\Skyline\SkylineFiles.cs:line 326
   at pwiz.Skyline.Controls.LongWaitDlg.RunWork(Action`1 performWork) in C:\proj\pwiz\pwiz_tools\Skyline\Controls\LongWaitDlg.cs:line 254
   --- End of inner exception stack trace ---
   at pwiz.Skyline.Util.Helpers.WrapAndThrowException(Exception x) in C:\proj\pwiz\pwiz_tools\Skyline\Util\Util.cs:line 1635
   at pwiz.Skyline.Controls.LongWaitDlg.PerformWork(Control parent, Int32 delayMillis, Action`1 performWork) in C:\proj\pwiz\pwiz_tools\Skyline\Controls\LongWaitDlg.cs:line 202
   at pwiz.Skyline.Controls.LongWaitDlg.PerformWork(Control parent, Int32 delayMillis, Action`1 performWork) in C:\proj\pwiz\pwiz_tools\Skyline\Controls\LongWaitDlg.cs:line 140
   at pwiz.Skyline.SkylineWindow.OpenFile(String path, FormEx parentWindow) in C:\proj\pwiz\pwiz_tools\Skyline\SkylineFiles.cs:line 342
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