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Issue 969: Trouble handling transition lists that declare precursor isotopes

issues
Status:closed
Assigned To:Guest
Type:Defect
Area:Skyline
Priority:3
Milestone: 
Opened:2023-09-11 11:51 by Brian Pratt
Changed:2026-01-06 13:04 by Brendan MacLean
Resolved:2026-01-06 13:04 by Brendan MacLean
Resolution:GitHub Move
Closed:2026-01-06 13:05 by Brendan MacLean
2023-09-11 11:51 Brian Pratt
Title»Trouble handling transition lists that declare precursor isotopes
Assigned To»Brian Pratt
Type»Defect
Area»Skyline
Priority»3
Per support request https://skyline.ms/announcements/home/support/thread.view?rowId=62293

A transition list (that Skyline produced) contains lines for the M+1 and M+2 peptide precursor isotopes. Skyline doesn't understand and throws an error.

These should probably just be ignored, let Skyline's usual mechanisms handle the isotope generation.

See the support request for example files.
2026-01-06 13:03 Brendan MacLean
resolve as GitHub Move
Statusopen»resolved
Assigned ToBrian Pratt»Brendan MacLean
Skyline issues have moved to GitHub Issues at https://github.com/ProteoWizard/pwiz/issues
Issues will be ported as necessary for active work.
2026-01-06 13:04 Brendan MacLean
close
Statusresolved»closed
Assigned ToBrendan MacLean»Guest