Error reading MaxQuant msms.txt file for building spectral library s26guan  2019-11-29

When I attempted to import "Peptide Search..." from MaxQuant search results, I got the attached error. What should I do? Thank you.

s26guan responded:  2019-11-29

I included "Acetyl (Protein N-term)" as custom modification in Peptide Settings. It is still not working.

s26guan responded:  2019-12-02

It works with Skyline-Daily. Thanks.

matt.chambers42 responded:  2019-12-03

Yes the daily version has a fix to support MaxQuant's new way of specifying modifications (it use to be limited to the first 2 letters of the mod name). Glad you got it working!