adding peptides to Skyline

support
adding peptides to Skyline rolandworth  2017-08-17 02:45
 
Hello,

I've added a peptide list to Skyline using the Insert peptide option but once the peptides are into the peptide tree they do not have any reporter masses ("children"). The peptide and transition settings are set to MS1 filtering so expect to see the 2+ and 3+ precursors for each peptide.
 
 
Brendan MacLean responded:  2017-08-17 10:58
Do you have "p" in the Transition Settings - Filter - Ion types field? Maybe post some screenshots of your Transition Settings.