Hi Jojo,
Yes, this is supported. In Skyline 2.5, three formats are supported:
PEPT[+80]IDER
PEPT[Phospho (ST)]IDER
PEPT(unimod:21)IDER
In a future version, we expect also to support the AB SCIEX 3-letter abbreviations:
PEPT[Pho]IDER
Give any of the first three a try. Thanks for posting your question.
--Brendan |