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Import speclib from DIANN with customized non-unimod modificationsgianin thomann2024-04-23 04:20gianin thomann2024-04-23 04:20
Problems with Exporting Peak Intensitiesmatser2024-04-19 22:16Nick Shulman2024-04-22 12:44
Loading transition list not workingylee2024-04-22 12:18Nick Shulman2024-04-22 12:40
regarding MSstatsashinybandgara222024-04-22 10:09Nick Shulman2024-04-22 12:04
How to create a library from the refined transitions in skyline?pavel shliaha2024-04-20 14:51Nick Shulman2024-04-20 14:54
Import of search results from ProteomeDiscoverer to build the spectral libraryyanyan qu309052024-04-19 09:03yanyan qu309052024-04-19 09:19
Multiple Skyline report templates combined into single Excel Workbook?josiah.hutton2024-04-17 11:28josiah.hutton2024-04-18 14:55
MSstats some R packages failed to downloadbandgara222024-04-17 00:59Nick Shulman2024-04-18 12:01
Report problemsjean-christophe prost2024-04-17 08:41jean-christophe prost2024-04-18 06:02
Transitions not selected even withjiwon hong2024-04-18 01:23jiwon hong2024-04-18 01:23
Importing raw files from Orbitrap Astral with FAIMSedf4n2024-04-17 12:54edf4n2024-04-17 17:27
How to make the integration easy and fast?nbekhti2024-04-16 18:50nbekhti2024-04-17 12:50
Error Library Building from FragPipe (can't find mzml/mgf)david schmidt2024-04-16 04:41Nick Shulman2024-04-17 08:04
artificial modificationpetra janning2024-04-17 07:14petra janning2024-04-17 08:03
modifications are not set correctlylode denolf2024-04-17 07:47lode denolf2024-04-17 07:47
modifications are not set correctlylode denolf2024-04-17 06:27Nick Shulman2024-04-17 07:23
two peptide bridges on the same amino acidvonroep2024-04-17 01:41Nick Shulman2024-04-17 07:14
Prosit server unavailablemichal zawadzki332232024-04-11 04:22Brendan MacLean2024-04-15 10:09
Skyline 21.1 versionnaimamuntu2024-04-15 08:41Nick Shulman2024-04-15 09:32
TMT neutral lossesaj102024-04-11 14:47aj102024-04-12 11:57
Ratio to surrogate ...a rocher2023-09-06 02:25a rocher2024-04-12 06:30
.wiff file chromatography import issueJiny2024-04-11 15:01Nick Shulman2024-04-11 15:07
Unable to execute the setup file to install Skyline 23.1khoil2024-04-11 11:06khoil2024-04-11 14:02
Avant Garde R Package Installation Failuresgoulding2023-10-05 14:05dkueltz2024-04-11 10:43
AvantGarde tool installdkueltz2024-04-11 08:21Nick Shulman2024-04-11 10:22
Display of transition chromatogramsdkueltz2024-04-11 08:18dkueltz2024-04-11 08:18
Quantificationnaimamuntu2024-04-10 23:44Nick Shulman2024-04-11 07:23
Missing DIA acquisitionguilherme pauperiolanfredi2024-04-11 00:08Nick Shulman2024-04-11 00:20
Ratio to surrogate standard using peak height?per larsson2024-04-09 02:12per larsson2024-04-09 08:16
TMT quantification tutorialsTK_12342024-04-09 07:42Nick Shulman2024-04-09 08:01
PRM run showing errorscvadival2024-04-03 12:32Nick Shulman2024-04-09 07:43
Unassigned spectraakhilabrai2024-04-05 22:23Mike MacCoss2024-04-07 13:56
Missing transitionJoerg2024-03-28 04:11Joerg2024-04-06 05:33
The tutorials in the official website and the tutorials in the software should be consistent, it's too messy now!8398687942024-04-06 02:448398687942024-04-06 02:44
TQ-XS Data not loadable in Skyline-daily (64-bit) 23.1.1.425 (b5b0d400b)Marvin2024-04-04 00:14Matt Chambers2024-04-05 08:43
BoxCarekilic2024-02-29 13:50Nick Shulman2024-04-04 14:16
Issue Report: AutoQC Execution Failurelhy32212024-04-02 21:24lhy32212024-04-03 05:55
Feature request: allow controlling display m/z range for library matchJuan C. Rojas E.2024-03-29 06:04Juan C. Rojas E.2024-04-03 02:12
Small molecules - Individual regression weighting for each analytes?johannes kutzler2023-10-14 10:54david fuentes2024-04-03 01:12
Audit logZac2024-04-01 10:34Rita Chupalov2024-04-02 11:45
DDA data missing retention time range of specific data filewangyan22024-04-01 12:57wangyan22024-04-02 10:27
not possible to open old skyline filesio2024-04-02 03:51Nick Shulman2024-04-02 06:59
Inquiry Regarding Potential Software Limitations or Known IssuesJordan Martinez2024-04-01 08:21Brendan MacLean2024-04-01 17:07
Cannot export thermo exploris methodlkittinun12024-03-30 03:37lkittinun12024-03-30 23:42
Simultaneously advance tabs in multiple windowsphilippmaternus2023-04-27 11:47philippmaternus2024-03-29 04:00
Calibration Curvenaimamuntu2024-03-20 21:28Nick Shulman2024-03-27 20:22
MRM QQQ transition peaks not detected in Skylineylee2024-03-26 14:34ylee2024-03-27 13:17
Total ratiovmohanty2024-03-27 12:06Nick Shulman2024-03-27 12:12
Doubts about transition listgabidap2024-03-27 06:46Brian Pratt2024-03-27 08:47
Chromatogram information unavailablelimsjy2024-03-24 22:30Nick Shulman2024-03-26 19:13
Manual tuning of the spectral libraryhassan hijazi2024-03-26 07:23Brian Pratt2024-03-26 10:11
Can not see Light/Endogeneous peptidesVM262024-03-20 18:28Nick Shulman2024-03-23 13:56
FAIMS CV optimization - Please Report "NA" in the Ion Mobility filtering settings for peptided with removed peakTobi2024-03-20 03:52Tobi2024-03-23 04:34
2+ charge state not available for selectionsstoychev235132024-03-21 11:11sstoychev235132024-03-21 15:28
here is the error codejason.murphy@novartis.com2024-03-20 11:45jason.murphy@novartis.com2024-03-21 10:57
Calibration Curveidoia beloqui-ezquer2024-03-21 02:53Nick Shulman2024-03-21 08:39
Importing MyriMatch search results into Skyline after parsing them through PeptideProphetstaab-weijnitz2024-03-16 09:33staab-weijnitz2024-03-20 09:31
Setting up skyline for a single labelrose gathungu2024-03-19 23:04Nick Shulman2024-03-19 23:38
Standard curve based on heavy peptidenegronil2024-03-19 03:03Nick Shulman2024-03-19 03:40
Intensity Threshold on MS2 fragments??zrhopkins2024-03-14 04:37Nick Shulman2024-03-15 08:28
Regressionvmohanty2024-03-14 09:53vmohanty2024-03-14 11:55
What are *.sky.view files and *.skyd and *.skyl. How can I open these files?Jenny Albanese2024-03-12 19:05Nick Shulman2024-03-12 19:39
Trouble identifying glycan modified peptides and quantifying ions in DIA datankegley2024-03-08 11:00Nick Shulman2024-03-12 10:53
SRM/ MRM Method Development and Data Analysis with Skylinenaimamuntu2024-03-11 11:17naimamuntu2024-03-11 13:34
"No Base Peak Chromatogram Found" when trying to integrate DDA datajarrod a roach2024-03-11 08:45jarrod a roach2024-03-11 12:20
Skyline not compatible with Shimadzu LCMS-8060William2021-04-19 21:10Nick Shulman2024-03-08 09:42
removing peaks' namemdorrani2024-03-07 14:22Brendan MacLean2024-03-07 22:01
PRM Target list creation from DDA dataQssf2024-03-05 18:41Qssf2024-03-06 12:34
Chromatogram Information Unavailable Messagecsb5482024-03-05 08:51csb5482024-03-05 09:49
Predicted RT worsens after ?calibrating ("Use Results")wphipps52024-02-29 15:54Nick Shulman2024-03-01 13:49
TSQ Atlis _ Chromatogram information unavailablenaimamuntu2024-02-29 14:13Nick Shulman2024-02-29 17:04
Spectral libraryandreas kalagasidis2024-02-24 03:38Nick Shulman2024-02-29 10:03
Chromatogram information unavailableliuh12024-02-26 13:35Nick Shulman2024-02-28 14:13
error importing fragpipe output into skylinejdemeter2024-02-27 16:34Matt Chambers2024-02-28 11:40
Failure opening Skyline-Daily filesamartinez32024-02-28 09:50Nick Shulman2024-02-28 10:03
Issues importing Small molecule transition listm3g4n2023-12-04 14:07Brian Pratt2024-02-27 13:45
TICherath lakmini senavirathna2024-02-27 12:01Nick Shulman2024-02-27 12:41
DIANN out in Skylinetania karasiewicz2024-02-26 05:17Nick Shulman2024-02-26 14:22
Chromatogram information unavailablePa Nic 142024-02-23 13:02Nick Shulman2024-02-26 13:24
Error Exporting to MassLynx Only with Scheduled Methodcbm112024-02-22 01:28cbm112024-02-26 05:16
Exporting scheduled MRM method to *.exp Masslynxper larsson2024-02-01 09:05Rita Chupalov2024-02-23 13:02
Error when Upload MSFragPipe output file to skylinewchu32024-02-23 10:44Nick Shulman2024-02-23 10:55
Distinguishing between heavy carbon and heavy hydrogenmolly hopper2024-02-22 11:24Nick Shulman2024-02-22 15:08
error using "DIA raw" option when performing Import Peptide Searchwphipps52024-02-21 14:53wphipps52024-02-22 12:32
Cannot Import Chromatograms from MassLynxcbm112024-02-19 06:40Nick Shulman2024-02-22 12:29
Explicit Retention Time from msp library for small moleculesmeowcat2024-02-13 02:56meowcat2024-02-22 00:29
skyline batch installationchi nguyen2024-02-21 16:45Nick Shulman2024-02-21 23:46
Skyline Error on MS data file importdb4322024-02-21 04:43Nick Shulman2024-02-21 07:39
Regression fitdanielacgranato2024-02-16 11:53danielacgranato2024-02-19 07:33
Analysis of Sciex MRM3 data from 7500 QTRAPh l elfrink2024-02-08 08:01Nick Shulman2024-02-16 09:45
Error in generating .mzid fileelvistc2024-02-15 22:09elvistc2024-02-16 02:08
Importing fractionation sample to SkylineGH2024-02-15 13:23Nick Shulman2024-02-15 13:47
Filter peptide contains specific peptide in libraryGH2024-02-14 11:43GH2024-02-15 13:24
Comparing MS1 data with and without FAIMSpaul.derbyshire@tsl.ac.uk2024-02-15 04:07Brian Pratt2024-02-15 10:31
a-ions from fully SIL labelled amino acidsjfoe2024-02-14 04:35jfoe2024-02-15 08:22
How to get Skyline to produce different molecule calibration curves in a single instance?manesh chand2024-02-14 15:46Nick Shulman2024-02-14 15:55
Spectrum annotation inconsitenciesjfoe2024-02-14 05:10jfoe2024-02-14 05:57
Spectral Library and Data processingdamlaaygun092024-02-12 04:46damlaaygun092024-02-14 04:07
Building a spectral library using msplaura corveleyn2021-02-02 03:24Juergen2024-02-14 01:03
Chromatogram information unvailablegazelezi2024-02-13 12:42gazelezi2024-02-13 14:13