Skyline version: 19.1.0.193 (64-bit) Installation ID: e7aac82b-414b-43e6-a418-92f07f6538dc Exception type: TargetInvocationException Error message: Index was outside the bounds of the array. -------------------- Stack trace: at pwiz.Skyline.Util.Helpers.WrapAndThrowException(Exception x) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Util\Util.cs:line 1868 at pwiz.Skyline.Util.ParallelEx.LoopWithExceptionHandling(Action loop, Action`1 catchClause) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Util\Util.cs:line 2128 at pwiz.Skyline.Util.ParallelEx.For(Int32 fromInclusive, Int32 toExclusive, Action`1 body, Action`1 catchClause, Nullable`1 maxThreads) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Util\Util.cs:line 2056 at pwiz.Skyline.Model.SrmDocument.ChangeSettingsInternal(SrmSettings settingsNew, SrmSettingsChangeMonitor progressMonitor) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\SrmDocument.cs:line 1060 at pwiz.Skyline.Model.SrmDocument.ChangeMeasuredResults(MeasuredResults results, SrmSettingsChangeMonitor progressMonitor) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\SrmDocument.cs:line 954 at pwiz.Skyline.Model.Results.ChromatogramManager.Loader.FinishLoadSynch(String documentPath, MeasuredResults resultsLoad, MeasuredResults resultsPrevious) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\Chromatogram.cs:line 300 at pwiz.Skyline.Model.Results.ChromatogramManager.Loader.FinishLoad(String documentPath, MeasuredResults resultsLoad, MeasuredResults resultsPrevious) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\Chromatogram.cs:line 247 at pwiz.Skyline.Model.Results.MeasuredResults.Loader.Complete(MeasuredResults results, Boolean final) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\MeasuredResults.cs:line 1555 at pwiz.Skyline.Model.Results.MeasuredResults.Loader.Load() in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\MeasuredResults.cs:line 1232 at pwiz.Skyline.Model.Results.MeasuredResults.Load(SrmDocument document, String documentPath, MultiFileLoadMonitor loadMonitor, MultiFileLoader multiFileLoader, Action`3 completed) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\MeasuredResults.cs:line 727 at pwiz.Skyline.Model.Results.ChromatogramManager.Loader.Load() in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\Chromatogram.cs:line 229 at pwiz.Skyline.Model.Results.ChromatogramManager.LoadBackground(IDocumentContainer container, SrmDocument document, SrmDocument docCurrent) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\Chromatogram.cs:line 193 at pwiz.Skyline.Model.BackgroundLoader.OnLoadBackground(IDocumentContainer container, SrmDocument document) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\BackgroundLoader.cs:line 127 Inner exceptions: Exception type: System.IndexOutOfRangeException Error message: Index was outside the bounds of the array. Index was outside the bounds of the array. at pwiz.Skyline.Util.BlockedArray`1.get_Item(Int32 index) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Util\Util.cs:line 1082 at pwiz.Skyline.Model.Results.ChromatogramGroupInfo.GetTransitionPeak(Int32 transitionIndex, Int32 peakIndex) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\ChromHeaderInfo.cs:line 2231 at pwiz.Skyline.Model.Results.ChromatogramInfo.GetPeak(Int32 peakIndex) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\Results\ChromHeaderInfo.cs:line 2518 at pwiz.Skyline.Model.TransitionGroupDocNode.UpdateResults(SrmSettings settingsNew, SrmSettingsDiff diff, PeptideDocNode nodePep, TransitionGroupDocNode nodePrevious) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\TransitionGroupDocNode.cs:line 1369 at pwiz.Skyline.Model.TransitionGroupDocNode.ChangeSettings(SrmSettings settingsNew, PeptideDocNode nodePep, ExplicitMods mods, SrmSettingsDiff diff) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\TransitionGroupDocNode.cs:line 1021 at pwiz.Skyline.Model.PeptideDocNode.ChangeSettings(SrmSettings settingsNew, SrmSettingsDiff diff, Boolean recurse) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\PeptideDocNode.cs:line 902 at pwiz.Skyline.Model.SrmDocument.<>c__DisplayClass140_5.b__7(Int32 i) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\SrmDocument.cs:line 1072 at pwiz.Skyline.Util.ParallelEx.<>c__DisplayClass4_0.b__0(Int32 i) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Util\Util.cs:line 2054 at pwiz.Skyline.Util.ParallelEx.<>c__DisplayClass4_0.b__2(IntHolder h, Int32 i) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Util\Util.cs:line 2058 at pwiz.Common.SystemUtil.ProducerConsumerWorker`2.Consume(Object threadIndex) in C:\proj\skyline_19_1_x64\pwiz_tools\Shared\Common\SystemUtil\ProducerConsumerWorker.cs:line 184 Exception caught at: at pwiz.Skyline.Model.BackgroundLoader.OnLoadBackground(IDocumentContainer container, SrmDocument document) in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\BackgroundLoader.cs:line 127 at pwiz.Skyline.Model.BackgroundLoader.<>c__DisplayClass15_0.b__0() in C:\proj\skyline_19_1_x64\pwiz_tools\Skyline\Model\BackgroundLoader.cs:line 84 at System.Threading.ExecutionContext.RunInternal(ExecutionContext executionContext, ContextCallback callback, Object state, Boolean preserveSyncCtx) at System.Threading.ExecutionContext.Run(ExecutionContext executionContext, ContextCallback callback, Object state, Boolean preserveSyncCtx) at System.Threading.ExecutionContext.Run(ExecutionContext executionContext, ContextCallback callback, Object state) at System.Threading.ThreadHelper.ThreadStart()